Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.
Code | Title | Technology | Library Type | Total Sequences |
Genome Matched Reads* |
Distinct Genome Matched Reads* |
t/r/sn/snoRNA Matched Reads |
Norm. Base Value |
Max. Len. of Reads |
Min. Len. of Reads |
GEO Accession Number |
---|---|---|---|---|---|---|---|---|---|---|---|
dcl5_1F_1_5mm | Maize dcl5-1//Dcl5, CRISPR T2, 1.5 mm anthers, -1bp/wt, fertile | SBS | sRNA | 24,064,348 | 13,084,011 | 1,295,777 | 2,272,487 | 20M | 34 | 18 | GSM3466686 |
dcl5_1F_2_0mm | Maize dcl5-1//Dcl5, CRISPR T2, 2.0 mm anthers, -1bp/wt, fertile | SBS | sRNA | 43,109,925 | 21,563,491 | 1,938,119 | 2,708,834 | 20M | 34 | 18 | GSM3466687 |
dcl5_1_1_5mm | Maize dcl5-1, CRISPR T2, 1.5 mm anthers, -1bp/-1bp, partial sterile | SBS | sRNA | 22,909,889 | 8,080,138 | 1,745,066 | 1,867,928 | 20M | 34 | 18 | GSM3466688 |
dcl5_1_2_0mm | Maize dcl5-1, CRISPR T2, 2.0 mm anthers, -1bp/-1bp, partial sterile | SBS | sRNA | 14,688,166 | 3,670,943 | 1,166,994 | 792,568 | 20M | 34 | 18 | GSM3466689 |
dcl5_2_1_5mm_a | Maize dcl5-2, CRISPR T2, 1.5 mm anthers, -3bp/-3bp, partial sterile | SBS | sRNA | 36,666,135 | 21,874,282 | 2,584,483 | 7,963,436 | 20M | 34 | 18 | GSM3466690 |
dcl5_2_2_0mm | Maize dcl5-2, CRISPR T2, 2.0 mm anthers, -3bp/-3bp, partial sterile | SBS | sRNA | 13,636,538 | 5,748,133 | 1,079,537 | 1,400,653 | 20M | 34 | 18 | GSM3466691 |
dcl5_3_1_5mm | Maize dcl5-3, CRISPR T2, 1.5 mm anthers, -12bp/-12bp, sterile | SBS | sRNA | 24,861,769 | 13,062,779 | 1,747,834 | 2,432,107 | 20M | 34 | 18 | GSM3466692 |
dcl5_3_2_0mm_a | Maize dcl5-3, CRISPR T2, 2.0 mm anthers, -12bp/-12bp, sterile | SBS | sRNA | 13,250,979 | 4,530,873 | 1,435,439 | 959,170 | 20M | 34 | 18 | GSM3466693 |
dcl5_3_2_0mm_b | Maize dcl5-3, CRISPR T2, 2.0 mm anthers, -12bp/-12bp, sterile | SBS | sRNA | 30,523,224 | 12,980,839 | 3,212,219 | 1,657,394 | 20M | 34 | 18 | GSM3466694 |
dcl5_4_1_5mm | Maize dcl5-4, CRISPR T2, 1.5 mm anthers, 149bp/ 149bp, sterile | SBS | sRNA | 29,017,229 | 14,565,542 | 1,962,283 | 3,413,415 | 20M | 34 | 18 | GSM3466695 |
dcl5_4_2_0mm | Maize dcl5-4, CRISPR T2, 2.0 mm anthers, 149bp/ 149bp, sterile | SBS | sRNA | 20,242,459 | 9,720,353 | 1,815,099 | 2,122,170 | 20M | 34 | 18 | GSM3466696 |
dcl5_5_1_5mm | Maize dcl5-5, CRISPR T2, 1.5 mm anthers, -10 bp/-10 bp, partial sterile, rep #1 | SBS | sRNA | 16,276,969 | 11,721,416 | 1,853,314 | 1,723,646 | 20M | 34 | 18 | |
dcl5_5_2_0mm | Maize dcl5-5, CRISPR T2, 2.0 mm anthers, -10 bp/-10 bp, partial sterile, rep #2 | SBS | sRNA | 13,238,870 | 9,447,580 | 2,123,630 | 1,278,668 | 20M | 34 | 18 | |
sTP_dcl5_1_2a | Permissive temp (23C/20C); dcl5-1 spikelets w 2 mm anther in upper floret and 1 mm anther in lower floret | SBS | sRNA | 29,794,870 | 21,322,630 | 6,172,536 | 1,026,961 | 20M | 34 | 18 | GSM3466697 |
sTP_dcl5_2_3a | Permissive temp (23C/20C); dcl5-1 spikelets w 3 mm anther in upper floret and 2 mm anther in lower floret | SBS | sRNA | 24,254,394 | 17,291,242 | 5,218,064 | 1,044,408 | 20M | 34 | 18 | GSM3466698 |
sTR_dcl5_1_2a | Restrictive temp (28C/22C); dcl5-1 spikelets w 2 mm anther in upper floret and 1 mm anther in lower floret | SBS | sRNA | 37,967,135 | 27,393,067 | 7,315,548 | 1,291,713 | 20M | 34 | 18 | GSM3466699 |
sTR_dcl5_2_3a | Restrictive temp (28C/22C); dcl5-1 spikelets w 3 mm anther in upper floret and 2 mm anther in lower floret | SBS | sRNA | 28,087,712 | 20,277,785 | 5,586,846 | 921,613 | 20M | 34 | 18 | GSM3466700 |
dcl5mu01_1 | dcl5 illumina mu allele, mu-illumina_252772.6, ear number: M531-7, 1.5 - 2.0 mm anthers | SBS | sRNA | 20,342,305 | 14,146,708 | 1,441,883 | 1,709,555 | 20M | 34 | 18 | |
dcl5mu02_1 | dcl5 illumina mu allele, mu-illumina_254833.6 ear number: R131-4/dcl5-4 bi-allelic allele, 1.5 - 2.0 mm anthers | SBS | sRNA | 17,886,296 | 12,327,882 | 1,582,558 | 2,117,613 | 20M | 34 | 18 | |
dcl5mu03_1 | dcl5 illumina mu allele, mu-illumina_139042.7 Ear: V610-3, 1.5 - 2.0 mm anthers | SBS | sRNA | 15,643,582 | 11,226,747 | 1,531,721 | 1,577,591 | 20M | 34 | 18 | |
dcl5mu04_1 | dcl5 illumina mu allele, ZJ701-7 (x) UFMu-03512, 1.5 - 2.0 mm anthers | SBS | sRNA | 21,016,303 | 14,626,492 | 1,779,044 | 1,646,451 | 20M | 34 | 18 | |
TR_W23_2_0mm_1 | W23 in 28/22 C, 2.0 mm anthers, rep 1 | SBS | sRNA | 18,465,093 | 12,297,340 | 1,531,659 | 1,372,598 | 20M | 34 | 18 | |
TR_W23_2_0mm_2 | W23 in 28/22 C, 2.0 mm anthers, rep 2 | SBS | sRNA | 19,111,682 | 13,044,840 | 1,549,744 | 1,614,344 | 20M | 34 | 18 | |
TP_W23_2_0mm_1 | W23 in 22/20 C, 2.0 mm anthers, rep 1 | SBS | sRNA | 17,897,306 | 12,411,035 | 1,523,198 | 1,463,654 | 20M | 34 | 18 | |
TP_W23_2_0mm_2 | W23 in 22/20 C, 2.0 mm anthers, rep 2 | SBS | sRNA | 19,865,452 | 13,660,139 | 1,671,434 | 1,603,306 | 20M | 34 | 18 |