maize_sRNA_dcl5 Next-Gen DB

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Code	Title	Technology	Total Sequences	Genome Matched Reads*	Distinct Genome Matched Reads*	t/r/sn/snoRNA Matched Reads	Norm. Base Value	Max. Len. of Reads	Min. Len. of Reads	GEO Accession Number
dcl5_1F_1_5mm	Maize dcl5-1//Dcl5, CRISPR T2, 1.5 mm anthers, -1bp/wt, fertile	SBS	24,064,348	13,084,011	1,295,777	2,272,487	20M	34	18	GSM3466686
dcl5_1F_2_0mm	Maize dcl5-1//Dcl5, CRISPR T2, 2.0 mm anthers, -1bp/wt, fertile	SBS	43,109,925	21,563,491	1,938,119	2,708,834	20M	34	18	GSM3466687
dcl5_1_1_5mm	Maize dcl5-1, CRISPR T2, 1.5 mm anthers, -1bp/-1bp, partial sterile	SBS	22,909,889	8,080,138	1,745,066	1,867,928	20M	34	18	GSM3466688
dcl5_1_2_0mm	Maize dcl5-1, CRISPR T2, 2.0 mm anthers, -1bp/-1bp, partial sterile	SBS	14,688,166	3,670,943	1,166,994	792,568	20M	34	18	GSM3466689
dcl5_2_1_5mm_a	Maize dcl5-2, CRISPR T2, 1.5 mm anthers, -3bp/-3bp, partial sterile	SBS	36,666,135	21,874,282	2,584,483	7,963,436	20M	34	18	GSM3466690
dcl5_2_2_0mm	Maize dcl5-2, CRISPR T2, 2.0 mm anthers, -3bp/-3bp, partial sterile	SBS	13,636,538	5,748,133	1,079,537	1,400,653	20M	34	18	GSM3466691
dcl5_3_1_5mm	Maize dcl5-3, CRISPR T2, 1.5 mm anthers, -12bp/-12bp, sterile	SBS	24,861,769	13,062,779	1,747,834	2,432,107	20M	34	18	GSM3466692
dcl5_3_2_0mm_a	Maize dcl5-3, CRISPR T2, 2.0 mm anthers, -12bp/-12bp, sterile	SBS	13,250,979	4,530,873	1,435,439	959,170	20M	34	18	GSM3466693
dcl5_3_2_0mm_b	Maize dcl5-3, CRISPR T2, 2.0 mm anthers, -12bp/-12bp, sterile	SBS	30,523,224	12,980,839	3,212,219	1,657,394	20M	34	18	GSM3466694
dcl5_4_1_5mm	Maize dcl5-4, CRISPR T2, 1.5 mm anthers, 149bp/ 149bp, sterile	SBS	29,017,229	14,565,542	1,962,283	3,413,415	20M	34	18	GSM3466695
dcl5_4_2_0mm	Maize dcl5-4, CRISPR T2, 2.0 mm anthers, 149bp/ 149bp, sterile	SBS	20,242,459	9,720,353	1,815,099	2,122,170	20M	34	18	GSM3466696
sTP_dcl5_1_2a	Permissive temp (23C/20C); dcl5-1 spikelets w 2 mm anther in upper floret and 1 mm anther in lower floret	SBS	29,794,870	21,322,630	6,172,536	1,026,961	20M	34	18	GSM3466697
sTP_dcl5_2_3a	Permissive temp (23C/20C); dcl5-1 spikelets w 3 mm anther in upper floret and 2 mm anther in lower floret	SBS	24,254,394	17,291,242	5,218,064	1,044,408	20M	34	18	GSM3466698
sTR_dcl5_1_2a	Restrictive temp (28C/22C); dcl5-1 spikelets w 2 mm anther in upper floret and 1 mm anther in lower floret	SBS	37,967,135	27,393,067	7,315,548	1,291,713	20M	34	18	GSM3466699
sTR_dcl5_2_3a	Restrictive temp (28C/22C); dcl5-1 spikelets w 3 mm anther in upper floret and 2 mm anther in lower floret	SBS	28,087,712	20,277,785	5,586,846	921,613	20M	34	18	GSM3466700

* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".
* The number of genomic-matches per small RNA ("hits") has been capped in this database at the following maximum: 50