Bread Wheat small RNA miRNA Abundances

The data below are based on the microRNAs listed in the miRBase registry. Adjust libraries/reads to display on the control panel.

        

        miRNA         miRNA sequence Len Sum (norm) Average Max Min (>0)  Tae_DR2Tae_FM1Tae_FM2Tae_AM1Tae_AM2Tae_TS1Tae_TS2
tae-miR10516 UCCUCUGCAGUCGACUGC 18 0 0 0 0    0 0 0 0 0 0 0
tae-miR10517 ACAUUCAGUCAUUGACAU 18 0 0 0 0    0 0 0 0 0 0 0
tae-miR10518 AAGAGAUUUUGAAGGGAU 18 0 0 0 0    0 0 0 0 0 0 0
tae-miR10519 UGUCAAAAGUUGGAUAUU 18 0 0 0 0    0 0 0 0 0 0 0
tae-miR10520 CUUGGAUGAGAACAUGGCAU 20 0 0 0 0    0 0 0 0 0 0 0
tae-miR10521 UUCGUUUUUUAUAGGAUGG 19 0 0 0 0    0 0 0 0 0 0 0
tae-miR1117 UAGUACCGGUUCGUGGCACGAACC 24 4 1 2 1    0 1 2 0 1 0 0
tae-miR1118 CACUACAUUAUGGAAUGGAGGGA 23 0 0 0 0    0 0 0 0 0 0 0
tae-miR1119 UGGCACGGCGUGAUGCUGAGUCAG 24 0 0 0 0    0 0 0 0 0 0 0
tae-miR1120a ACAUUCUUAUAUUAUGAGACGGAG 24 0 0 0 0    0 0 0 0 0 0 0
tae-miR1120b-3p UUCUUAUAUUGUGGGACAGAG 21 143 20 36 10    10 21 36 14 16 21 25
tae-miR1120c-5p UAAUAUAAGAACGUUUUUGAC 21 54 8 17 4    0 6 4 16 6 17 5
tae-miR1121 AGUAGUGAUCUAAACGCUCUUA 22 0 0 0 0    0 0 0 0 0 0 0
tae-miR1122a UAGAUACAUCCGUAUCUAGA 20 0 0 0 0    0 0 0 0 0 0 0
tae-miR1122b-3p AGACUUAUAUGUAGGAACGGA 21 7 1 3 1    1 1 1 0 3 0 1
tae-miR1122c-3p UCUAAUAUUAUGGGACGGAGG 21 170 24 33 15    18 33 27 15 29 17 31
tae-miR1123 UCCGUGAGACCUGGUCUCAUAGA 23 0 0 0 0    0 0 0 0 0 0 0
tae-miR1124 GCAGGACGUGAAGAGCGAGUCC 22 0 0 0 0    0 0 0 0 0 0 0
tae-miR1125 AACCAACGAGACCAACUGCGGCGG 24 0 0 0 0    0 0 0 0 0 0 0
tae-miR1127a UCCUUCCGUUCGGAAUUAC 19 0 0 0 0    0 0 0 0 0 0 0
tae-miR1127b-3p ACAAGUAUUUCUGGACGGAGG 21 37 5 9 2    5 9 2 6 8 4 3
tae-miR1128 UACUACUCCCUCCGUCCGAAA 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR1129 CAGCGAGCCAGCGGAGACCGGCAG 24 0 0 0 0    0 0 0 0 0 0 0
tae-miR1130a CCUCCGUCUCGUAAUGUAAGACG 23 0 0 0 0    0 0 0 0 0 0 0
tae-miR1130b-3p UCUUAUAUUAUGGGACGGAGG 21 1,845 264 332 171    171 332 327 202 269 260 284
tae-miR1131 UAGUACCGGUUCGUGGCUAACC 22 0 0 0 0    0 0 0 0 0 0 0
tae-miR1133 CAUAUACUCCCUCCGUCCGAAA 22 0 0 0 0    0 0 0 0 0 0 0
tae-miR1134 CAACAACAACAAGAAGAAGAAGAU 24 0 0 0 0    0 0 0 0 0 0 0
tae-miR1135 CUGCGACAAGUAAUUCCGAACGGA 24 218 31 44 18    26 34 44 44 27 25 18
tae-miR1136 UUGUCGCAGGUAUGGAUGUAUCUA 24 8 1 3 1    3 1 0 0 3 1 0
tae-miR1137a UAGUACAAAGUUGAGUCAUC 20 0 0 0 0    0 0 0 0 0 0 0
tae-miR1137b-5p UCCGUUCCAGAAUAGAUGACC 21 202 29 36 22    22 36 29 25 33 32 25
tae-miR1138 GCUUAGAUGUGACAUCCUUAAAA 23 0 0 0 0    0 0 0 0 0 0 0
tae-miR1139 AGAGUAACAUACACUAGUAACA 22 0 0 0 0    0 0 0 0 0 0 0
tae-miR156 UGACAGAAGAGAGUGAGCACA 21 17 2 8 2    0 2 0 0 0 7 8
tae-miR159a UUUGGAUUGAAGGGAGCUCUG 21 506,862 72,409 118,845 28,478    118,845 97,002 94,552 51,477 86,917 28,478 29,591
tae-miR159b UUUGGAUUGAAGGGAGCUCUG 21 506,862 72,409 118,845 28,478    118,845 97,002 94,552 51,477 86,917 28,478 29,591
tae-miR160 UGCCUGGCUCCCUGUAUGCCA 21 1,605 229 500 142    238 500 226 144 142 162 193
tae-miR164 UGGAGAAGCAGGGCACGUGCA 21 757 108 195 39    104 157 195 101 114 47 39
tae-miR167a UGAAGCUGCCAGCAUGAUCUA 21 25,790 3,684 7,969 627    7,969 3,077 7,563 2,160 3,640 754 627
tae-miR167b UGAAGCUGACAGCAUGAUCUA 21 11 2 6 1    6 0 1 1 0 3 0
tae-miR167c-5p UGAAGCUGCCAGCAUGAUCUGC 22 339 48 160 1    6 7 1 4 6 160 155
tae-miR169 GGGCAAGUCACCCUGGGCUACC 22 0 0 0 0    0 0 0 0 0 0 0
tae-miR171a UGAUUGAGCCGUGCCAAUAUC 21 140 20 45 9    10 9 16 22 12 45 26
tae-miR171b UUGAGCCGUGCCAAUAUCACG 21 195 28 89 2    2 2 6 9 3 84 89
tae-miR1847-5p ACCUGCAGUUGGGCCAAUGAC 21 6 1 2 1    1 0 1 2 2 0 0
tae-miR2275-3p UUUGGUUUCCUCCAAUAUCUCG 22 1 0 1 1    0 0 0 0 0 1 0
tae-miR319 UUGGACUGAAGGGAGCUCCCU 21 640 91 178 19    178 150 149 40 64 40 19
tae-miR395a GUGAAGUGUUUGGGGGAACUC 21 8 1 4 1    1 2 4 0 0 0 1
tae-miR395b UGAAGUGUUUGGGGGAACUC 20 229 33 55 7    29 15 55 7 39 40 44
tae-miR396-5p AACUGUGAACUCGCGGGGAUG 21 4 1 3 1    0 0 0 0 0 3 1
tae-miR397-5p UCACCGGCGCUGCACACAAUG 21 86 12 17 9    9 15 9 17 10 14 12
tae-miR398 UGUGUUCUCAGGUCGCCCCCG 21 18 3 10 8    0 0 0 0 0 10 8
tae-miR399 UGCCAAAGGAGAAUUGCCC 19 0 0 0 0    0 0 0 0 0 0 0
tae-miR408 CUGCACUGCCUCUUCCCUGGC 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR444a UUGCUGCCUCAAGCUUGCUGC 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR444b UUGCUGCCUCAAGCUUGCUGC 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR5048-5p UUUGCAGGUUUUAGGUCUAAGU 22 30,340 4,334 6,654 2,896    4,659 6,654 4,543 4,126 4,442 3,020 2,896
tae-miR5049-3p AAUAUGGAUCGGAGGGAGUAC 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR5050 UUGAACGACCUCACCAUGUCG 21 1 0 1 1    0 0 0 0 0 1 0
tae-miR5062-5p UGAACCUUAGGGAACAGCCGCAU 23 358 51 94 28    94 60 63 49 33 28 31
tae-miR5084 AUACAGUACUGCAGAGGAUCCUAA 24 6 1 3 1    0 1 0 1 1 3 0
tae-miR5085 AAGGACAUUUUUUGUGGCCUG 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR5086 ACAUUGGUGGAAGGCGUGGUA 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR5175-5p UUCCAAAUUACUCGUCGUGGU 21 319 46 82 11    11 33 25 82 54 52 62
tae-miR5200 UGUAGAUACUCCCUAAGGCUU 21 26 4 10 4    0 0 0 6 6 4 10
tae-miR530 UGCAGUGGCAUAUGCAACUCU 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR531 CGCUCGCCGGAGCAGCGUGCA 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR5384-3p UGAGCGCGCCGCCGUCGAAUG 21 9 1 6 1    0 0 1 0 2 6 0
tae-miR6197-5p UCUGUAAACAAAUGUAGGACG 21 217 31 54 17    43 32 54 20 17 30 21
tae-miR6201 UGACCCUGAGGCACUCAUACCG 22 3,948 564 962 103    103 185 264 779 742 962 913
tae-miR7757-5p AUAAAACCUUCAGCUAUCCAUC 22 24,210 3,459 5,360 1,805    5,360 3,313 4,075 3,646 4,149 1,805 1,862
tae-miR9652-3p AAGCUUAAUGAGAACAUGUG 20 1 0 1 1    0 0 0 0 1 0 0
tae-miR9652-5p CCUGUUUGUCAUUAAGUUUCUU 22 27 4 16 1    9 1 16 0 1 0 0
tae-miR9653a-3p UUUGAGACUUUGGCCAUGGCC 21 1,496 214 293 92    92 293 193 217 213 229 259
tae-miR9653b UGGCCAAGGUCUCUUGAGGCU 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR9654a-3p UUCUGAAAGGCUUGAAGCGAAU 22 0 0 0 0    0 0 0 0 0 0 0
tae-miR9654b-3p UUCCGAAAGGCUUGAAGCGAAU 22 60 9 17 5    5 5 10 9 6 17 8
tae-miR9655-3p CAAGGGAAGGAAGUAGCCAAC 21 16 2 8 1    0 0 0 0 1 7 8
tae-miR9656-3p CUUCGAGACUCUGAACAGCGG 21 120 17 56 1    0 2 0 5 1 56 56
tae-miR9657a-3p UGUGCUUCCUCGUCGAACGGU 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR9657b-3p CGUGCUUCCUCGUCGAACGGU 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR9657b-5p UUCGUCGGAGAAGCAUGUUGC 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR9657c-3p CGUGCUUCCUCGUCGAACGGU 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR9658-3p AUCGUUCUGGGUGAAUAGGCC 21 1,906 272 466 83    370 466 445 170 279 83 93
tae-miR9659-3p UCCAAUGGUUGUUCACGGCAUC 22 2 0 1 1    1 1 0 0 0 0 0
tae-miR9660-5p UUGCGAGCAACGGAUGAAUC 20 9 1 6 1    2 0 1 0 6 0 0
tae-miR9661-5p UGAAGUAGAGCAGGGACCUCA 21 16 2 6 1    6 1 0 0 2 4 3
tae-miR9662a-3p UUGAACAUCCCAGAGCCACCG 21 36,313 5,188 6,214 3,658    6,130 5,998 4,196 4,340 3,658 5,777 6,214
tae-miR9662b-3p UGAACAUCCCAGAGCCACCGG 21 8,304 1,186 1,791 754    1,791 1,496 1,251 922 1,093 754 997
tae-miR9663-5p AAGCGUAGUCGAACGAAUCUG 21 3,136 448 569 310    451 335 535 310 382 569 554
tae-miR9664-3p UUGCAGUCCUCGAUGUCGUAG 21 187 27 83 1    2 7 1 8 17 83 69
tae-miR9665-3p GCUAGCAGUGUAAACUCAAAUCA 23 0 0 0 0    0 0 0 0 0 0 0
tae-miR9666a-3p CGGUAGGGCUGUAUGAUGGCGA 22 226 32 112 1    1 0 4 6 6 112 97
tae-miR9666b-3p CGGUUGGGCUGUAUGAUGGCGA 22 451 64 200 5    5 9 17 27 31 200 162
tae-miR9666b-5p GCCAUCAUACGUCCAACCGUG 21 8 1 4 1    0 0 0 3 0 4 1
tae-miR9666c-5p GCCAUCAUACGUCCAACCGUG 21 8 1 4 1    0 0 0 3 0 4 1
tae-miR9667-5p AAAUAUGGCAAACAAUGAAUG 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR9668-5p CCAAUGACAAGUAUUUUCGGA 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR9669-5p UACUGUGGGCACUUAUUUGAC 21 4,823 689 994 421    920 994 844 421 622 487 535
tae-miR9670-3p AGGUGGAAUACUUGAAGAAGA 21 2,229 318 469 215    345 317 215 252 259 469 372
tae-miR9671-5p UGACUUUACACAACUGUCCGGC 22 5 1 3 1    0 0 0 0 1 1 3
tae-miR9672a-3p CCACGACUGUCAUUAAGCAUC 21 6,464 923 1,921 86    86 513 408 1,151 904 1,481 1,921
tae-miR9672b UACCACGACUGUCAUUAAGCA 21 145,141 20,734 52,280 1,024    1,024 6,119 2,108 27,535 23,058 33,017 52,280
tae-miR9673-5p UAAGAAGCAAAUAGCACAUG 20 13 2 3 2    2 2 2 2 2 3 0
tae-miR9674a-5p GCAUCAUCCAUCCUACCAUUC 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR9674b-5p AUAGCAUCAUCCAUCCUACCC 21 6,426 918 1,297 479    1,297 986 1,213 793 1,157 479 501
tae-miR9675-3p UUUAUGAUCACUCUCGUUUUG 21 45 6 26 1    1 0 0 1 0 26 17
tae-miR9676-5p UGGAUGUCAUCGUGGCCGUACA 22 278 40 132 1    0 1 7 19 8 132 111
tae-miR9677a UGGCCGUUGGUAGAGUAGGAGA 22 5,117 731 2,614 2    3 2 5 13 6 2,614 2,474
tae-miR9677b CAGGGCGGGGAACAGGUGGCC 21 290 41 154 136    0 0 0 0 0 154 136
tae-miR9678-3p UCUGGCGAGGGACAUACACUGU 22 0 0 0 0    0 0 0 0 0 0 0
tae-miR9679-5p CAGAACCAGAAUGAGUAGCUC 21 64 9 18 2    16 2 7 7 5 18 9
tae-miR9772 UGAGAUGAGAUUACCCCAUAC 21 1,024 146 249 101    249 146 170 137 114 107 101
tae-miR9773 UUUGUUUUUAUGUUAUUUUGUGAA 24 729 104 175 23    23 97 73 106 115 175 140
tae-miR9774 CAAGAUAUUGGGUAUUUCUGUC 22 1 0 1 1    0 0 0 1 0 0 0
tae-miR9775 UGUGCGCAAUAAGAUUUUGCUA 22 7 1 3 1    0 0 0 3 3 0 1
tae-miR9776 UUGGACGAGGAUGUGCAACUG 21 752 107 293 6    6 16 21 74 56 293 286
tae-miR9777 AGCAAACAUAUCUGAGCACA 20 22 3 8 1    8 2 1 4 6 0 1
tae-miR9778 UGCAUCAUCUCGAACUCGUCG 21 3 0 3 3    3 0 0 0 0 0 0
tae-miR9779 CUUAUGCAACGUCUGAGGAU 20 0 0 0 0    0 0 0 0 0 0 0
tae-miR9780 CGGGUCGGCGCUGCACGCGGC 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR9781 UUUUGUCACAUAUAAUACAUA 21 0 0 0 0    0 0 0 0 0 0 0
tae-miR9782 GUAUUAGGUUGGUCAAAUUGACGA 24 75 11 17 6    0 6 12 17 14 17 9
tae-miR9783 AUAAGCACCGGUGCUUAAGAA 21 0 0 0 0    0 0 0 0 0 0 0