tauschii_sRNA2 Next-Gen DB

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code	Title	Technology	Library Type	Total Sequences	Genome Matched Reads*	Distinct Genome Matched Reads*	t/r/sn/snoRNA Matched Reads	Norm. Base Value	Max. Len. of Reads	Min. Len. of Reads	GEO Accession Number
TrA_0dCntrl_3	Triticum aestivum 0 DAT control	SBS	sRNA	8,099,925	4,286,782	540,109	1,236,688	3M	30	18	SRR3721341
TrA_0dHt_3	Triticum aestivum 0 DAT w/ heat stress	SBS	sRNA	4,955,583	1,300,699	303,248	2,258,994	3M	30	18	SRR3721342
TrA_0dLt_3	Triticum aestivum 0 DAT w/ light stress	SBS	sRNA	7,553,896	3,396,427	606,898	1,363,903	3M	30	18	SRR3721343
TrA_0dUV_3	Triticum aestivum 0 DAT w/ UV stress	SBS	sRNA	7,767,347	2,986,454	535,176	2,140,396	3M	30	18	SRR3721344
TrA_0dCntrl_2	Triticum aestivum 0 DAT control	SBS	sRNA	6,932,221	3,445,599	496,883	997,158	3M	30	18	SRR3721345
TrA_0dHt_2	Triticum aestivum 0 DAT w/ heat stress	SBS	sRNA	6,407,230	1,473,199	304,236	3,332,964	3M	30	18	SRR3721346
TrA_0dLt_2	Triticum aestivum 0 DAT w/ light stress	SBS	sRNA	6,869,528	3,085,254	429,481	1,291,840	3M	30	18	SRR3721347
TrA_0dUV_2	Triticum aestivum 0 DAT w/ UV stress	SBS	sRNA	7,929,830	2,374,118	456,532	2,955,377	3M	30	18	SRR3721348
TrA_0dCntrl_1	Triticum aestivum 0 DAT control	SBS	sRNA	5,207,286	2,241,156	418,633	973,834	3M	30	18	SRR3721349
TrA_0dHt_1	Triticum aestivum 0 DAT w/ heat stress	SBS	sRNA	6,678,545	1,608,255	349,255	3,342,698	3M	30	18	SRR3721350
TrA_0dLt_1	Triticum aestivum 0 DAT w/ light stress	SBS	sRNA	7,543,415	3,360,549	583,130	1,634,195	3M	30	18	SRR3721351
TrA_0dUV_1	Triticum aestivum 0 DAT w/ UV stress	SBS	sRNA	7,781,644	3,071,593	500,492	2,506,180	3M	30	18	SRR3721352
TrA_1dCntrl_3	Triticum aestivum 1 DAT control	SBS	sRNA	4,193,986	1,618,788	284,230	1,089,204	3M	30	18	SRR3721353
TrA_1dHt_3	Triticum aestivum 1 DAT w/ heat stress	SBS	sRNA	5,665,203	1,434,799	315,240	2,826,880	3M	30	18	SRR3721354
TrA_1dLt_3	Triticum aestivum 1 DAT w/ light stress	SBS	sRNA	5,551,366	2,350,399	417,546	1,298,850	3M	30	18	SRR3721355
TrA_1dUV_3	Triticum aestivum 1 DAT w/ UV stress	SBS	sRNA	4,984,849	2,253,667	277,353	998,264	3M	30	18	SRR3721356
TrA_1dCntrl_2	Triticum aestivum 1 DAT control	SBS	sRNA	8,101,923	3,242,202	524,761	2,477,091	3M	30	18	SRR3721357
TrA_1dHt_2	Triticum aestivum 1 DAT w/ heat stress	SBS	sRNA	6,475,394	1,678,171	370,105	3,098,454	3M	30	18	SRR3721358
TrA_1dLt_2	Triticum aestivum 1 DAT w/ light stress	SBS	sRNA	7,600,960	2,805,095	459,840	2,231,413	3M	30	18	SRR3721359
TrA_1dUV_2	Triticum aestivum 1 DAT w/ UV stress	SBS	sRNA	7,344,170	3,129,608	530,588	1,639,667	3M	30	18	SRR3721360
TrA_1dCntrl_1	Triticum aestivum 1 DAT control	SBS	sRNA	6,542,450	2,521,187	481,244	1,585,934	3M	30	18	SRR3721361
TrA_1dHt_1	Triticum aestivum 1 DAT w/ heat stress	SBS	sRNA	4,953,151	1,284,648	260,169	2,168,813	3M	30	18	SRR3721362
TrA_1dLt_1	Triticum aestivum 1 DAT w/ light stress	SBS	sRNA	3,885,509	1,660,224	245,919	855,724	3M	30	18	SRR3721363
TrA_1dUV_1	Triticum aestivum 1 DAT w/ UV stress	SBS	sRNA	5,900,856	2,424,997	432,683	1,353,950	3M	30	18	SRR3721364
TrA_2dCntrl_3	Triticum aestivum 2 DAT control	SBS	sRNA	8,710,799	4,199,388	710,160	1,580,616	3M	30	18	SRR3721365
TrA_2dHt_3	Triticum aestivum 2 DAT w/ heat stress	SBS	sRNA	7,660,191	3,255,012	496,888	1,733,233	3M	30	18	SRR3721367
TrA_2dLt_3	Triticum aestivum 2 DAT w/ light stress	SBS	sRNA	6,313,730	2,065,990	457,046	2,445,288	3M	30	18	SRR3721366
TrA_2dUV_3	Triticum aestivum 2 DAT w/ UV stress	SBS	sRNA	8,311,143	3,313,963	574,211	2,420,092	3M	30	18	SRR3721369
TrA_2dCntrl_2	Triticum aestivum 2 DAT control	SBS	sRNA	5,424,370	1,640,273	366,646	2,030,709	3M	30	18	SRR3721370
TrA_2dHt_2	Triticum aestivum 2 DAT w/ heat stress	SBS	sRNA	7,341,005	2,621,705	462,729	2,208,326	3M	30	18	SRR3721368
TrA_2dLt_2	Triticum aestivum 2 DAT w/ light stress	SBS	sRNA	6,782,186	3,070,083	477,699	1,353,409	3M	30	18	SRR3721371
TrA_2dUV_2	Triticum aestivum 2 DAT w/ UV stress	SBS	sRNA	5,264,743	2,330,659	315,222	1,140,259	3M	30	18	SRR3721372
TrA_2dCntrl_1	Triticum aestivum 2 DAT control	SBS	sRNA	6,935,446	2,828,041	522,837	2,000,515	3M	30	18	SRR3721373
TrA_2dHt_1	Triticum aestivum 2 DAT w/ heat stress	SBS	sRNA	5,060,353	1,608,374	339,594	1,687,193	3M	30	18	SRR3721374
TrA_2dLt_1	Triticum aestivum 2 DAT w/ light stress	SBS	sRNA	6,920,209	3,304,676	519,867	1,494,590	3M	30	18	SRR3721375
TrA_2dUV_1	Triticum aestivum 2 DAT w/ UV stress	SBS	sRNA	6,761,232	2,787,601	436,750	1,561,748	3M	30	18	SRR3721376
TrA_3dCntrl_3	Triticum aestivum 3 DAT control	SBS	sRNA	8,244,194	2,988,771	542,876	2,532,281	3M	30	18	SRR3721377
TrA_3dHt_3	Triticum aestivum 3 DAT w/ heat stress	SBS	sRNA	6,491,140	1,752,299	420,446	2,701,984	3M	30	18	SRR3721378
TrA_3dLt_3	Triticum aestivum 3 DAT w/ light stress	SBS	sRNA	6,593,472	3,085,484	530,276	1,432,740	3M	30	18	SRR3721379
TrA_3dUV_3	Triticum aestivum 3 DAT w/ UV stress	SBS	sRNA	7,117,336	2,885,600	509,398	1,623,683	3M	30	18	SRR3721380
TrA_3dCntrl_2	Triticum aestivum 3 DAT control	SBS	sRNA	7,759,285	3,467,665	621,849	1,825,100	3M	30	18	SRR3721381
TrA_3dHt_2	Triticum aestivum 3 DAT w/ heat stress	SBS	sRNA	7,143,016	2,472,498	530,863	2,170,735	3M	30	18	SRR3721382
TrA_3dLt_2	Triticum aestivum 3 DAT w/ light stress	SBS	sRNA	6,706,799	3,004,051	487,717	1,719,760	3M	30	18	SRR3721383
TrA_3dUV_2	Triticum aestivum 3 DAT w/ UV stress	SBS	sRNA	8,294,358	3,144,212	617,544	2,154,931	3M	30	18	SRR3721384
TrA_3dCntrl_1	Triticum aestivum 3 DAT control	SBS	sRNA	8,307,817	3,388,154	695,344	2,210,297	3M	30	18	SRR3721385
TrA_3dHt_1	Triticum aestivum 3 DAT w/ heat stress	SBS	sRNA	7,949,108	2,264,220	562,632	3,226,805	3M	30	18	SRR3721386
TrA_3dLt_1	Triticum aestivum 3 DAT w/ light stress	SBS	sRNA	7,516,310	3,157,462	491,380	1,864,646	3M	30	18	SRR3721387
TrA_3dUV_1	Triticum aestivum 3 DAT w/ UV stress	SBS	sRNA	8,160,926	3,071,385	610,436	2,206,170	3M	30	18	SRR3721388
TrA_7dCntrl_3	Triticum aestivum 7 DAT control	SBS	sRNA	10,726,048	3,892,271	605,459	3,204,675	3M	30	18	SRR3721389
TrA_7dHt_3	Triticum aestivum 7 DAT w/ heat stress	SBS	sRNA	8,167,025	2,600,077	524,602	3,318,507	3M	30	18	SRR3721390
TrA_7dLt_3	Triticum aestivum 7 DAT w/ light stress	SBS	sRNA	10,556,094	4,444,882	718,440	3,017,588	3M	30	18	SRR3721391
TrA_7dUV_3	Triticum aestivum 7 DAT w/ UV stress	SBS	sRNA	8,680,600	3,128,949	567,360	2,589,270	3M	30	18	SRR3721392
TrA_7dCntrl_2	Triticum aestivum 7 DAT control	SBS	sRNA	7,683,520	2,990,734	575,272	2,037,661	3M	30	18	SRR3721393
TrA_7dHt_2	Triticum aestivum 7 DAT w/ heat stress	SBS	sRNA	7,254,264	2,835,417	571,096	2,246,098	3M	30	18	SRR3721394
TrA_7dLt_2	Triticum aestivum 7 DAT w/ light stress	SBS	sRNA	11,261,061	4,623,125	659,820	2,737,568	3M	30	18	SRR3721395
TrA_7dUV_2	Triticum aestivum 7 DAT w/ UV stress	SBS	sRNA	8,765,387	3,601,924	521,759	2,114,561	3M	30	18	SRR3721396
TrA_7dCntrl_1	Triticum aestivum 7 DAT control	SBS	sRNA	10,398,614	4,080,730	622,797	2,584,715	3M	30	18	SRR3721397
TrA_7dHt_1	Triticum aestivum 7 DAT w/ heat stress	SBS	sRNA	7,946,526	2,638,815	559,580	2,591,594	3M	30	18	SRR3721398
TrA_7dLt_1	Triticum aestivum 7 DAT w/ light stress	SBS	sRNA	7,876,891	3,711,739	567,157	1,320,951	3M	30	18	SRR3721399
TrA_7dUV_1	Triticum aestivum 7 DAT w/ UV stress	SBS	sRNA	7,480,809	3,017,235	460,402	1,978,803	3M	30	18	SRR3721400
TrA_10dCntrl_3	Triticum aestivum 10 DAT control	SBS	sRNA	10,082,751	4,199,094	664,407	2,337,637	3M	30	18	SRR3721401
TrA_10dHt_3	Triticum aestivum 10 DAT w/ heat stress	SBS	sRNA	9,548,437	2,247,929	569,327	4,535,437	3M	30	18	SRR3721402
TrA_10dLt_3	Triticum aestivum 10 DAT w/ light stress	SBS	sRNA	8,459,551	3,259,719	629,973	2,255,793	3M	30	18	SRR3721403
TrA_10dUV_3	Triticum aestivum 10 DAT w/ UV stress	SBS	sRNA	8,063,648	2,683,226	501,761	2,819,363	3M	30	18	SRR3721404
TrA_10dCntrl_2	Triticum aestivum 10 DAT control	SBS	sRNA	10,160,102	4,463,863	770,436	2,591,694	3M	30	18	SRR3721405
TrA_10dHt_2	Triticum aestivum 10 DAT w/ heat stress	SBS	sRNA	8,509,713	3,435,506	599,087	2,019,303	3M	30	18	SRR3721406
TrA_10dLt_2	Triticum aestivum 10 DAT w/ light stress	SBS	sRNA	9,619,755	3,809,760	712,237	2,936,534	3M	30	18	SRR3721407
TrA_10dUV_2	Triticum aestivum 10 DAT w/ UV stress	SBS	sRNA	7,494,456	2,359,643	502,754	2,807,468	3M	30	18	SRR3721408
TrA_10dCntrl_1	Triticum aestivum 10 DAT control	SBS	sRNA	9,378,977	3,788,007	629,678	2,364,918	3M	30	18	SRR3721409
TrA_10dHt_1	Triticum aestivum 10 DAT w/ heat stress	SBS	sRNA	8,676,672	3,322,489	652,447	2,852,067	3M	30	18	SRR3721410
TrA_10dLt_1	Triticum aestivum 10 DAT w/ light stress	SBS	sRNA	10,080,613	3,582,002	600,351	3,026,265	3M	30	18	SRR3721411
TrA_10dUV_1	Triticum aestivum 10 DAT w/ UV stress	SBS	sRNA	10,867,803	2,917,244	623,641	4,508,233	3M	30	18	SRR3721412

* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".
* The number of genomic-matches per small RNA ("hits") has been capped in this database at the following maximum: 100