Ae. tauschii Small RNA Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
Max.
Len. of
Reads
Min.
Len. of
Reads
GEO
Accession
Number
TrA_0dCntrl_3 Triticum aestivum 0 DAT controlSBS8,099,9254,286,782540,1091,236,6883M3018SRR3721341
TrA_0dHt_3 Triticum aestivum 0 DAT w/ heat stressSBS4,955,5831,300,699303,2482,258,9943M3018SRR3721342
TrA_0dLt_3 Triticum aestivum 0 DAT w/ light stressSBS7,553,8963,396,427606,8981,363,9033M3018SRR3721343
TrA_0dUV_3 Triticum aestivum 0 DAT w/ UV stressSBS7,767,3472,986,454535,1762,140,3963M3018SRR3721344
TrA_0dCntrl_2 Triticum aestivum 0 DAT controlSBS6,932,2213,445,599496,883997,1583M3018SRR3721345
TrA_0dHt_2 Triticum aestivum 0 DAT w/ heat stressSBS6,407,2301,473,199304,2363,332,9643M3018SRR3721346
TrA_0dLt_2 Triticum aestivum 0 DAT w/ light stressSBS6,869,5283,085,254429,4811,291,8403M3018SRR3721347
TrA_0dUV_2 Triticum aestivum 0 DAT w/ UV stressSBS7,929,8302,374,118456,5322,955,3773M3018SRR3721348
TrA_0dCntrl_1 Triticum aestivum 0 DAT controlSBS5,207,2862,241,156418,633973,8343M3018SRR3721349
TrA_0dHt_1 Triticum aestivum 0 DAT w/ heat stressSBS6,678,5451,608,255349,2553,342,6983M3018SRR3721350
TrA_0dLt_1 Triticum aestivum 0 DAT w/ light stressSBS7,543,4153,360,549583,1301,634,1953M3018SRR3721351
TrA_0dUV_1 Triticum aestivum 0 DAT w/ UV stressSBS7,781,6443,071,593500,4922,506,1803M3018SRR3721352
TrA_1dCntrl_3 Triticum aestivum 1 DAT controlSBS4,193,9861,618,788284,2301,089,2043M3018SRR3721353
TrA_1dHt_3 Triticum aestivum 1 DAT w/ heat stressSBS5,665,2031,434,799315,2402,826,8803M3018SRR3721354
TrA_1dLt_3 Triticum aestivum 1 DAT w/ light stressSBS5,551,3662,350,399417,5461,298,8503M3018SRR3721355
TrA_1dUV_3 Triticum aestivum 1 DAT w/ UV stressSBS4,984,8492,253,667277,353998,2643M3018SRR3721356
TrA_1dCntrl_2 Triticum aestivum 1 DAT controlSBS8,101,9233,242,202524,7612,477,0913M3018SRR3721357
TrA_1dHt_2 Triticum aestivum 1 DAT w/ heat stressSBS6,475,3941,678,171370,1053,098,4543M3018SRR3721358
TrA_1dLt_2 Triticum aestivum 1 DAT w/ light stressSBS7,600,9602,805,095459,8402,231,4133M3018SRR3721359
TrA_1dUV_2 Triticum aestivum 1 DAT w/ UV stressSBS7,344,1703,129,608530,5881,639,6673M3018SRR3721360
TrA_1dCntrl_1 Triticum aestivum 1 DAT controlSBS6,542,4502,521,187481,2441,585,9343M3018SRR3721361
TrA_1dHt_1 Triticum aestivum 1 DAT w/ heat stressSBS4,953,1511,284,648260,1692,168,8133M3018SRR3721362
TrA_1dLt_1 Triticum aestivum 1 DAT w/ light stressSBS3,885,5091,660,224245,919855,7243M3018SRR3721363
TrA_1dUV_1 Triticum aestivum 1 DAT w/ UV stressSBS5,900,8562,424,997432,6831,353,9503M3018SRR3721364
TrA_2dCntrl_3 Triticum aestivum 2 DAT controlSBS8,710,7994,199,388710,1601,580,6163M3018SRR3721365
TrA_2dHt_3 Triticum aestivum 2 DAT w/ heat stressSBS7,660,1913,255,012496,8881,733,2333M3018SRR3721367
TrA_2dLt_3 Triticum aestivum 2 DAT w/ light stressSBS6,313,7302,065,990457,0462,445,2883M3018SRR3721366
TrA_2dUV_3 Triticum aestivum 2 DAT w/ UV stressSBS8,311,1433,313,963574,2112,420,0923M3018SRR3721369
TrA_2dCntrl_2 Triticum aestivum 2 DAT controlSBS5,424,3701,640,273366,6462,030,7093M3018SRR3721370
TrA_2dHt_2 Triticum aestivum 2 DAT w/ heat stressSBS7,341,0052,621,705462,7292,208,3263M3018SRR3721368
TrA_2dLt_2 Triticum aestivum 2 DAT w/ light stressSBS6,782,1863,070,083477,6991,353,4093M3018SRR3721371
TrA_2dUV_2 Triticum aestivum 2 DAT w/ UV stressSBS5,264,7432,330,659315,2221,140,2593M3018SRR3721372
TrA_2dCntrl_1 Triticum aestivum 2 DAT controlSBS6,935,4462,828,041522,8372,000,5153M3018SRR3721373
TrA_2dHt_1 Triticum aestivum 2 DAT w/ heat stressSBS5,060,3531,608,374339,5941,687,1933M3018SRR3721374
TrA_2dLt_1 Triticum aestivum 2 DAT w/ light stressSBS6,920,2093,304,676519,8671,494,5903M3018SRR3721375
TrA_2dUV_1 Triticum aestivum 2 DAT w/ UV stressSBS6,761,2322,787,601436,7501,561,7483M3018SRR3721376
TrA_3dCntrl_3 Triticum aestivum 3 DAT controlSBS8,244,1942,988,771542,8762,532,2813M3018SRR3721377
TrA_3dHt_3 Triticum aestivum 3 DAT w/ heat stressSBS6,491,1401,752,299420,4462,701,9843M3018SRR3721378
TrA_3dLt_3 Triticum aestivum 3 DAT w/ light stressSBS6,593,4723,085,484530,2761,432,7403M3018SRR3721379
TrA_3dUV_3 Triticum aestivum 3 DAT w/ UV stressSBS7,117,3362,885,600509,3981,623,6833M3018SRR3721380
TrA_3dCntrl_2 Triticum aestivum 3 DAT controlSBS7,759,2853,467,665621,8491,825,1003M3018SRR3721381
TrA_3dHt_2 Triticum aestivum 3 DAT w/ heat stressSBS7,143,0162,472,498530,8632,170,7353M3018SRR3721382
TrA_3dLt_2 Triticum aestivum 3 DAT w/ light stressSBS6,706,7993,004,051487,7171,719,7603M3018SRR3721383
TrA_3dUV_2 Triticum aestivum 3 DAT w/ UV stressSBS8,294,3583,144,212617,5442,154,9313M3018SRR3721384
TrA_3dCntrl_1 Triticum aestivum 3 DAT controlSBS8,307,8173,388,154695,3442,210,2973M3018SRR3721385
TrA_3dHt_1 Triticum aestivum 3 DAT w/ heat stressSBS7,949,1082,264,220562,6323,226,8053M3018SRR3721386
TrA_3dLt_1 Triticum aestivum 3 DAT w/ light stressSBS7,516,3103,157,462491,3801,864,6463M3018SRR3721387
TrA_3dUV_1 Triticum aestivum 3 DAT w/ UV stressSBS8,160,9263,071,385610,4362,206,1703M3018SRR3721388
TrA_7dCntrl_3 Triticum aestivum 7 DAT controlSBS10,726,0483,892,271605,4593,204,6753M3018SRR3721389
TrA_7dHt_3 Triticum aestivum 7 DAT w/ heat stressSBS8,167,0252,600,077524,6023,318,5073M3018SRR3721390
TrA_7dLt_3 Triticum aestivum 7 DAT w/ light stressSBS10,556,0944,444,882718,4403,017,5883M3018SRR3721391
TrA_7dUV_3 Triticum aestivum 7 DAT w/ UV stressSBS8,680,6003,128,949567,3602,589,2703M3018SRR3721392
TrA_7dCntrl_2 Triticum aestivum 7 DAT controlSBS7,683,5202,990,734575,2722,037,6613M3018SRR3721393
TrA_7dHt_2 Triticum aestivum 7 DAT w/ heat stressSBS7,254,2642,835,417571,0962,246,0983M3018SRR3721394
TrA_7dLt_2 Triticum aestivum 7 DAT w/ light stressSBS11,261,0614,623,125659,8202,737,5683M3018SRR3721395
TrA_7dUV_2 Triticum aestivum 7 DAT w/ UV stressSBS8,765,3873,601,924521,7592,114,5613M3018SRR3721396
TrA_7dCntrl_1 Triticum aestivum 7 DAT controlSBS10,398,6144,080,730622,7972,584,7153M3018SRR3721397
TrA_7dHt_1 Triticum aestivum 7 DAT w/ heat stressSBS7,946,5262,638,815559,5802,591,5943M3018SRR3721398
TrA_7dLt_1 Triticum aestivum 7 DAT w/ light stressSBS7,876,8913,711,739567,1571,320,9513M3018SRR3721399
TrA_7dUV_1 Triticum aestivum 7 DAT w/ UV stressSBS7,480,8093,017,235460,4021,978,8033M3018SRR3721400
TrA_10dCntrl_3 Triticum aestivum 10 DAT controlSBS10,082,7514,199,094664,4072,337,6373M3018SRR3721401
TrA_10dHt_3 Triticum aestivum 10 DAT w/ heat stressSBS9,548,4372,247,929569,3274,535,4373M3018SRR3721402
TrA_10dLt_3 Triticum aestivum 10 DAT w/ light stressSBS8,459,5513,259,719629,9732,255,7933M3018SRR3721403
TrA_10dUV_3 Triticum aestivum 10 DAT w/ UV stressSBS8,063,6482,683,226501,7612,819,3633M3018SRR3721404
TrA_10dCntrl_2 Triticum aestivum 10 DAT controlSBS10,160,1024,463,863770,4362,591,6943M3018SRR3721405
TrA_10dHt_2 Triticum aestivum 10 DAT w/ heat stressSBS8,509,7133,435,506599,0872,019,3033M3018SRR3721406
TrA_10dLt_2 Triticum aestivum 10 DAT w/ light stressSBS9,619,7553,809,760712,2372,936,5343M3018SRR3721407
TrA_10dUV_2 Triticum aestivum 10 DAT w/ UV stressSBS7,494,4562,359,643502,7542,807,4683M3018SRR3721408
TrA_10dCntrl_1 Triticum aestivum 10 DAT controlSBS9,378,9773,788,007629,6782,364,9183M3018SRR3721409
TrA_10dHt_1 Triticum aestivum 10 DAT w/ heat stressSBS8,676,6723,322,489652,4472,852,0673M3018SRR3721410
TrA_10dLt_1 Triticum aestivum 10 DAT w/ light stressSBS10,080,6133,582,002600,3513,026,2653M3018SRR3721411
TrA_10dUV_1 Triticum aestivum 10 DAT w/ UV stressSBS10,867,8032,917,244623,6414,508,2333M3018SRR3721412



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".
* The number of genomic-matches per small RNA ("hits") has been capped in this database at the following maximum: 100