Maize B73 small RNA Library Information

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Code Title Technology Library Type Total
Sequences		 Genome
Matched
Reads*		 Distinct
Genome
Matched
Reads*		 t/r/sn/snoRNA
Matched
Reads		 Norm.
Base
Value		 Max.
Len. of
Reads		 Min.
Len. of
Reads		 GEO
Accession
Number
1_A619 wildtype A619, 2 week old seedlings, biological rep 1SBSsRNA10,234,4536,383,6191,299,108277,62210M3318GSM1277437
2_A619 wildtype A619, 2 week old seedlings, biological rep 2SBSsRNA19,957,58114,304,5413,234,356538,57610M3418GSM1277438
3_A619 wildtype A619, 2 week old seedlings, biological rep 3SBSsRNA26,611,75017,192,9363,260,5523,453,09810M3418GSM1529456
4_A619 wildtype A619, 2-week-old seedling, rep 4SBSsRNA17,736,36215,322,7741,371,987697,62010M3418
5_A619 wildtype A619, 2-week-old seedling, rep 5SBSsRNA15,413,70213,113,1521,500,506630,53510M3418
1_fzt fuzzy tassel mutant dcl1, 2 week old seedlings, biological rep 1SBSsRNA7,928,4753,109,515649,200131,58210M3318GSM1277440
2_fzt fuzzy tassel mutant dcl1, 2 week old seedlings, biological rep 2SBSsRNA18,893,33313,251,4903,065,855643,72310M3418GSM1277441
3_fzt fuzzy tassel mutant dcl1, 2 week old seedlings, biological rep 3SBSsRNA16,146,0749,473,8482,273,1412,685,09610M3418GSM1529457
4_fzt fuzzy tassel mutant dcl1, 2-week-old seedling, rep 4SBSsRNA15,821,28512,430,3312,199,504637,38010M3418
5_fzt fuzzy tassel mutant dcl1, 2-week-old seedling, rep 5SBSsRNA15,010,70712,804,8591,204,355685,01810M3418
1T_A619 wildtype A619, 0.5-1cm tassel primordial, rep 1SBSsRNA25,417,12019,506,0124,659,623404,78310M3418GSM1277442
2T_A619 wildtype A619, 0.5-1cm tassel primordial, rep 2SBSsRNA39,914,11832,724,6614,800,2341,306,69310M3418GSM1277443
3T_A619 wildtype A619, 0.5-1cm tassel primordial, rep 3SBSsRNA31,949,64126,068,2495,297,994766,69510M3418GSM1277444
1T_fzt fuzzy tassel mutant dcl1, 0.5-1cm tassel primordial, rep 1SBSsRNA26,803,81020,116,6623,919,994518,39910M3418GSM1277445
2T_fzt fuzzy tassel mutant dcl1, 0.5-1cm tassel primordial, rep 2SBSsRNA42,999,37035,228,0344,724,2411,255,54310M3418GSM1277446
3T_fzt fuzzy tassel mutant dcl1, 0.5-1cm tassel primordial, rep 3SBSsRNA31,817,06525,304,8375,252,731694,01110M3418GSM1277447



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".
* The number of genomic-matches per small RNA ("hits") has been capped in this database at the following maximum: 50