Maize Small RNA Library Information

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Code Title Technology Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
GEO
Accession
Number
1_A619 wildtype A619, 2 week old seedlings, biological rep 1SBS10,234,4536,171,5891,302,968455,70510MGSM1277437
2_A619 wildtype A619, 2 week old seedlings, biological rep 2SBS19,957,58114,262,0793,233,430540,26610MGSM1277438
3_A619 wildtype A619, 2 week old seedlings, biological rep 3SBS26,611,75017,138,8933,263,8413,412,46010MGSM1529456
4_A619 wildtype A619, 2-week-old seedling, rep 4SBS17,736,36215,399,0121,381,790558,42910M
5_A619 wildtype A619, 2-week-old seedling, rep 5SBS15,413,70213,165,6371,505,779532,71810M
1_fzt fuzzy tassel mutant dcl1, 2 week old seedlings, biological rep 1SBS7,928,4753,066,517653,924148,98410MGSM1277440
2_fzt fuzzy tassel mutant dcl1, 2 week old seedlings, biological rep 2SBS18,893,33313,298,9353,066,346552,57810MGSM1277441
3_fzt fuzzy tassel mutant dcl1, 2 week old seedlings, biological rep 3SBS16,146,0749,348,6462,276,8952,743,74110MGSM1529457
4_fzt fuzzy tassel mutant dcl1, 2-week-old seedling, rep 4SBS15,821,28512,483,5002,202,371538,24010M
5_fzt fuzzy tassel mutant dcl1, 2-week-old seedling, rep 5SBS15,010,70712,877,5671,212,285563,75310M
1T_A619 wildtype A619, 0.5-1cm tassel primordial, rep 1SBS25,417,12019,507,3594,655,199347,79210MGSM1277442
2T_A619 wildtype A619, 0.5-1cm tassel primordial, rep 2SBS39,914,11832,950,4924,820,562826,45410MGSM1277443
3T_A619 wildtype A619, 0.5-1cm tassel primordial, rep 3SBS31,949,64126,178,4995,308,205508,22310MGSM1277444
1T_fzt fuzzy tassel mutant dcl1, 0.5-1cm tassel primordial, rep 1SBS26,803,81020,111,6483,916,912461,14410MGSM1277445
2T_fzt fuzzy tassel mutant dcl1, 0.5-1cm tassel primordial, rep 2SBS42,999,37035,466,2054,748,031737,73710MGSM1277446
3T_fzt fuzzy tassel mutant dcl1, 0.5-1cm tassel primordial, rep 3SBS31,817,06525,403,0685,261,168459,07310MGSM1277447



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".
* The number of genomic-matches per small RNA ("hits") has been capped in this database at the following maximum: 50