Maize Small RNA Library Information

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Code Title Technology Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
GEO
Accession
Number
0.2Fertile_r1 maize fertile anthers, 0.2 mm, rep 1.SBS12,896,3669,791,3321,340,79497,15810MGSM1262524
0.4Fertile_r1 maize fertile anthers, 0.4 mm, rep 1.SBS35,286,90426,740,1084,031,504457,34710MGSM1262525
0.7Fertile_r1 maize fertile anthers, 0.7 mm, rep 1.SBS34,045,56428,303,5652,360,148517,79510MGSM1262526
1.0Fertile_r1 maize fertile anthers, 1.0 mm, rep 1.SBS34,019,13627,917,1052,172,129901,63610MGSM1262527
1.5Fertile_r1 maize fertile anthers, 1.5 mm, rep 1.SBS37,521,38930,354,8751,853,040493,54010MGSM1262528
2.0Fertile_r1 maize fertile anthers, 2.0 mm, rep 1.SBS35,796,93727,621,4142,454,087575,91910MGSM1262529
2.5Fertile_r1 maize fertile anthers, 2.5 mm, rep 1.SBS55,306,86745,996,4462,974,2571,288,80910MGSM1262530
3.0Fertile_r1 maize fertile anthers, 3.0 mm, rep 1.SBS26,285,04822,409,0731,697,278575,75710MGSM1262531
4.0Fertile_r1 maize fertile anthers, 4.0 mm, rep 1.SBS40,210,29735,006,0121,339,749902,93610MGSM1262532
5.0Fertile_r1 maize fertile anthers, 5.0 mm, rep 1.SBS29,748,54325,965,9131,421,459541,67110MGSM1262533
PLN_Fertile_r1 maize mature pollen, rep 1.SBS33,201,39128,333,8671,711,538611,04910MGSM1262534
0.2Fertile_r2 maize fertile anthers, 0.2 mm rep 2.SBS21,549,90116,437,1691,314,268184,50010MGSM1262535
0.4Fertile_r2 maize fertile anthers, 0.4 mm rep 2.SBS36,257,47027,116,7441,228,663125,57010MGSM1262536
0.7Fertile_r2 maize fertile anthers, 0.7 mm rep 2.SBS41,837,82530,925,6971,558,590245,24310MGSM1262537
1.0Fertile_r2 maize fertile anthers, 1.0 mm rep 2.SBS37,594,67830,416,8151,285,286475,49510MGSM1262538
1.5Fertile_r2 maize fertile anthers, 1.5 mm rep 2.SBS27,713,84020,963,5471,019,106251,99810MGSM1262539
2.0Fertile_r2 maize fertile anthers, 2.0 mm rep 2.SBS48,664,03837,454,7671,637,713617,66910MGSM1262540
2.5Fertile_r2 maize fertile anthers, 2.5 mm rep 2.SBS50,543,59238,626,2981,762,472901,09010MGSM1262541
3.0Fertile_r2 maize fertile anthers, 3.0 mm rep 2.SBS28,476,78622,526,9881,459,631458,86910MGSM1262542
4.0Fertile_r2 maize fertile anthers, 4.0 mm rep 2.SBS27,693,41722,530,0431,863,950380,19110MGSM1262543
5.0Fertile_r2 maize fertile anthers, 5.0 mm rep 2SBS27,562,22722,923,492918,854407,06810MGSM1262544
PLN_Fertile_r2 maize mature pollen, rep 2SBS33,953,60027,712,546937,997526,30610MGSM1262545
0.4Fertile_r3 maize fertile anthers, 0.4 mm, rep 3SBS25,908,57618,513,2584,316,185163,78710MGSM1262546
0.7Fertile_r3 maize fertile anthers, 0.7 mm, rep 3SBS22,135,68115,832,7693,082,409134,10510MGSM1262547
1.0Fertile_r3 maize fertile anthers, 1.0 mm, rep 3.SBS29,761,64520,960,8853,139,278816,52210MGSM1262548
1.5Fertile_r3 maize fertile anthers, 1.5 mm, rep 3.SBS26,530,20717,964,5532,531,679232,66010MGSM1262549
2.0Fertile_r3 maize fertile anthers, 2.0 mm, rep 3.SBS23,136,15317,117,4731,821,118294,41910MGSM1262550
2.5Fertile_r3 maize fertile anthers, 2.5 mm, rep 3.SBS24,169,55318,703,9412,095,893255,73510MGSM1262551
3.0Fertile_r3 maize fertile anthers, 3.0 mm, rep 3.SBS23,155,44619,135,3662,209,643473,33910MGSM1262552
4.0Fertile_r3 maize fertile anthers, 4.0 mm, rep 3.SBS23,592,08619,363,3153,094,277481,95810MGSM1262553
5.0Fertile_r3 maize fertile anthers, 5.0 mm, rep 3.SBS23,453,24920,943,5661,260,749499,97310MGSM1262554
PollenFertile_r3 maize mature pollen, rep 3.SBS20,949,77718,715,984864,924497,31910MGSM1262555
0.4msca1_r1 msca1 maize anthers, 0.4 mm rep 1.SBS27,411,33719,239,211627,061318,44410MGSM1262556
0.7msca1_r1 msca1 maize anthers, 0.7 mm rep 1.SBS59,440,68345,066,2891,661,519478,53810MGSM1262557
1.0msca1_r1 msca1 maize anthers, 1.0 mm rep 1.SBS55,737,19442,082,2682,178,054448,70010MGSM1262558
1.5msca1_r1 msca1 maize anthers, 1.5 mm rep 1.SBS46,311,82338,767,7851,962,187463,41610MGSM1262559
2.0_msca1_r1 msca1 maize anthers, 2.0 mm rep 1.SBS42,201,46135,880,6892,905,813718,27410MGSM1262560
0.4msca1_r2 msca1 maize anthers, 0.4 mm rep 2.SBS28,727,24519,870,8734,116,707287,69910MGSM1262561
0.7msca1_r2 msca1 maize anthers, 0.7 mm rep 2.SBS23,976,87417,686,6352,841,017188,91510MGSM1262562
1.0msca1_r2 msca1 maize anthers, 1.0 mm rep 2.SBS29,907,55516,499,5283,496,999297,25310MGSM1262563
1.5msca1_r2 msca1 maize anthers, 1.5 mm rep 2.SBS27,780,35119,154,2805,256,317369,00810MGSM1262564
2.0msca1_r2 msca1 maize anthers, 2.0 mm rep 2.SBS29,416,75920,385,4385,123,850429,57610MGSM1262565
0.4ocl4_r1 ocl4 maize anthers, 0.4 mm rep 1.SBS55,691,54045,593,4335,141,2401,023,94110MGSM1262576
0.7ocl4_r1 ocl4 maize anthers, 0.7 mm rep 1.SBS22,313,23219,121,5461,193,050300,56110MGSM1262577
1.0ocl4_r1 ocl4 maize anthers, 1.0 mm rep 1.SBS29,806,62525,077,2572,305,845351,90110MGSM1262578
1.5ocl4_r1 ocl4 maize anthers, 1.5 mm rep 1.SBS29,278,46923,653,8782,293,249333,70410MGSM1262579
2.0ocl4_r1 ocl4 maize anthers, 2.0 mm rep 1.SBS33,040,04226,486,3042,060,051514,97310MGSM1262580
0.4ocl4_r2 ocl4 maize anthers, 0.4 mm rep 2.SBS21,950,61816,929,6714,325,372252,26310MGSM1262581
0.7ocl4_r2 ocl4 maize anthers, 0.7 mm rep 2.SBS33,723,31826,051,1936,210,148461,73210MGSM1262582
1.0ocl4_r2 ocl4 maize anthers, 1.0 mm rep 2.SBS32,660,81725,016,6035,391,786824,14710MGSM1262583
1.5ocl4_r2 ocl4 maize anthers, 1.5 mm rep 2.SBS30,812,34222,171,0382,901,146469,58610MGSM1262584
2.0ocl4_r2 ocl4 maize anthers, 2.0 mm rep 2.SBS35,018,55724,944,9372,458,219417,39310MGSM1262585
0.4mac1_r1 mac1 maize anthers, 0.4 mm rep 2.SBS22,736,86417,986,3253,006,766386,01710MGSM1262571
0.7mac1_r1 mac1 maize anthers, 0.7 mm rep 1.SBS13,809,82210,799,6731,449,17698,96610MGSM1262567
1.0mac1_r1 mac1 maize anthers, 1.0 mm rep 1.SBS28,443,45021,923,8162,788,888384,53410MGSM1262568
1.5mac1_r1 mac1 maize anthers, 1.5 mm rep 1.SBS87,956,85269,423,2566,665,3381,538,43810MGSM1262569
2.0mac1_r1 mac1 maize anthers, 2.0 mm rep 1.SBS13,649,13911,098,5921,350,080331,45610MGSM1262570
0.4mac1_r2 mac1 maize anthers, 0.4 mm rep 1.SBS22,849,12517,798,3573,198,364332,67110MGSM1262566
0.7mac1_r2 mac1 maize anthers, 0.7 mm rep 2.SBS28,981,72019,888,6693,329,617256,49510MGSM1262572
1.0mac1_r2 mac1 maize anthers, 1.0 mm rep 2.SBS27,639,03418,057,4943,282,284304,80910MGSM1262573
1.5mac1_r2 mac1 maize anthers, 1.5 mm rep 2.SBS27,594,08620,245,9523,072,547521,89410MGSM1262574
2.0mac1_r2 mac1 maize anthers, 2.0 mm rep 2.SBS30,501,47021,200,0703,970,9081,012,77610MGSM1262575
0.4ms23_r1 ms23 maize anthers, line 610_19 (sterile), 0.4 mmSBS39,740,43833,326,2874,936,858341,84910MGSM2415843
0.7ms23_r1 ms23 maize anthers, line 610_1 (sterile), 0.7 mmSBS32,941,16427,770,6003,117,411390,49110MGSM2415844
0.7 ms23_r2 ms23 maize anthers, line 610_19 (sterile), 0.7 mmSBS39,416,75233,221,8463,430,935522,12810MGSM2415845
1.0 ms23_r1 ms23 maize anthers, line 610_2 (sterile), 1.0 mmSBS39,001,90731,919,5824,548,145453,11510MGSM2415846
1.0 ms23_r2 ms23 maize anthers, line 610_16 (sterile), 1.0 mmSBS39,915,74333,974,8263,547,125518,11410MGSM2415847
1.5 ms23_r1 ms23 maize anthers, line 610_2 (sterile), 1.5 mmSBS42,336,65335,160,0503,667,335607,33210MGSM2415848
1.5 ms23_r2 ms23 maize anthers, line 610_16 (sterile), 1.5 mmSBS39,239,15532,174,8353,886,863523,56410MGSM2415849
2.0 ms23_r1 ms23 maize anthers, line 610_2 (sterile), 2.0 mmSBS45,636,25337,890,1554,102,395790,14510MGSM2415850
2.0 ms23_r2 ms23 maize anthers, line 610_16 (sterile), 2.0 mmSBS29,803,02024,716,2523,072,766487,15210MGSM2415851
0.4am1_489_r1 ameiotic1 (489) maize anthers, male sterile, 0.4 mm rep 1.SBS51,538,49045,138,4811,776,650200,86410MGSM3752432
0.7am1_489_r1 ameiotic1 (489) maize anthers, male sterile, 0.7 mm rep 1.SBS44,424,55337,612,1012,331,630442,72010MGSM3752433
1.0am1_489_r1 ameiotic1 (489) maize anthers, male sterile, 1.0 mm rep 1.SBS59,996,98050,551,5383,083,678577,68510MGSM3752434
1.5am1_489_r1 ameiotic1 (489) maize anthers, male sterile, 1.5 mm rep 1.SBS20,232,93616,851,1441,227,689189,81610MGSM3752435
1.5am1_489_r2 ameiotic1 (489) maize anthers, male sterile, 1.5 mm rep 2.SBS40,436,86132,610,9314,194,304807,44910MGSM3752436
1.0am1_p_r1 ameiotic1 (praI) maize anthers, male sterile, 1.0 mm rep 1.SBS48,944,06037,911,2533,877,8821,966,45310MGSM3752437
1.0am1_p_r2 ameiotic1 (praI) maize anthers, male sterile, 1.0 mm rep 2.SBS36,561,95127,599,9592,938,5781,636,19510MGSM3752438
1.0am1_p_r3 ameiotic1 (praI) maize anthers, male sterile, 1.0 mm rep 3.SBS44,856,17835,576,5494,176,5621,084,85310MGSM3752439
1.5am1_p_r1 ameiotic1 (praI) maize anthers, male sterile, 1.5 mm rep 1.SBS47,168,13039,565,0302,341,505593,33210MGSM3752440
1.5am1_p_r2 ameiotic1 (praI) maize anthers, male sterile, 1.5 mm rep 2.SBS19,533,48414,370,6621,721,453387,31610MGSM3752441
1.5am1_p_r3 ameiotic1 (praI) maize anthers, male sterile, 1.5 mm rep 3.SBS31,583,50224,278,1352,671,334557,32310MGSM3752442
1.5WT_489_r1 Fertile sib (of am1-489), maize anthers, 1.5 mm rep 1.SBS47,289,14139,997,1662,832,257667,21810MGSM3752443
1.5WT_489_r2 Fertile sib (of am1-489), maize anthers, 1.5 mm rep 2.SBS51,992,42843,087,7723,792,587853,99710MGSM3752444
1.5WT_489_r3 Fertile sib (of am1-489), maize anthers, 1.5 mm rep 3.SBS43,986,96836,559,0063,517,881756,09910MGSM3752445
1.25am1_p_r1 ameiotic1 (praI) maize anthers 1.25 mm, rep 1SBS21,374,18015,118,5441,915,094516,84610MGSM3752446
1.25am1_p_r2 ameiotic1 (praI) maize anthers 1.25 mm, rep 2SBS17,285,23213,449,8311,804,567480,00210MGSM3752447
1.25am1_p_r3 ameiotic1 (praI) maize anthers 1.25 mm, rep 3SBS26,822,31119,206,3572,716,6751,074,67010MGSM3752448
1.25WT_p_r1 Fertile sib (of am1-praI), maize anthers 1.25 mm, rep 1SBS38,255,51726,199,6273,249,8531,002,35010MGSM3752449
1.25WT_p_r2 Fertile sib (of am1-praI), maize anthers 1.25 mm, rep 2SBS34,629,11523,729,2563,701,6351,145,72310MGSM3752450
1.25WT_p_r3 Fertile sib (of am1-praI), maize anthers 1.25 mm, rep 3SBS31,319,77922,873,5062,954,775766,51310MGSM3752451
1.25am1_489_r1 am1-489 maize anthers 1.25 mm, rep 1SBS21,891,53017,921,2982,197,102594,07710MGSM3752452
1.25am1_489_r2 am1-489 maize anthers 1.25 mm, rep 2SBS15,347,29012,623,5101,845,695415,89210MGSM3752453
1.25WT_489_r1 Fertile sib (of am1-489), maize anthers 1.25 mm, rep 1SBS17,987,20114,994,4911,750,306449,78010MGSM3752454
1.25WT_489_r2 Fertile sib (of am1-489), maize anthers 1.25 mm, rep 2SBS18,273,86515,229,7831,712,889370,85610MGSM3752455
1.25WT_489_r3 Fertile sib (of am1-489), maize anthers 1.25 mm, rep 3SBS16,772,03714,113,3411,660,011324,56710MGSM3752456



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".
* The number of genomic-matches per small RNA ("hits") has been capped in this database at the following maximum: 50