Chicken Small RNA Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Library Type Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
GEO
Accession
Number
MSB1 MSB1 cellsSBSsRNA3,102,4631,730,46544,62145,2271M
HVT Herpesvirus of Turkeys (HVT) infected chicken embryo fibroblasts (CEF)SBSsRNA2,864,1952,270,47839,35633,3171M
ILTV Infectious laryngotracheitis virus (ILTV) infected CEFSBSsRNA2,609,4231,718,04746,33036,5941M
Spln1 Spleen isolated from normal chickenSBSsRNA2,219,0871,453,21253,22516,1151M
Spln2 Spleen isolated from normal chickenSBSsRNA2,224,5811,503,12854,13716,4111M
Tcell Chicken splenic T cellsSBSsRNA3,981,4812,507,023158,256193,1171M
aTcel1 Activated T cells 1SBSsRNA1,666,571819,133123,135213,8401M
aTcel2 Activated T cells 2SBSsRNA2,550,2651,165,689168,565303,5001M
Tumr1 MDV-induced splenic tumor 1SBSsRNA1,958,650744,550173,562264,5001M
Tumr2 MDV-induced splenic tumor 2SBSsRNA1,876,903739,336171,114268,1581M
454Lib241 MDV infected CEF454sRNA122,69857316125400
454Lib242 Uninfected CEF454sRNA90,91028010016400



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".