Brachypodium Small RNA Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Library Type Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
Max.
Len. of
Reads
Min.
Len. of
Reads
GEO
Accession
Number
OBD01 Panicle 2SBSsRNA3,992,3732,303,5161,154,804491,3062M3018GSM506620
BDI05 Panicle 1SBSsRNA4,944,1823,553,6161,536,276562,0332M3418GSM506621
BDI08 RootSBSsRNA5,139,4302,912,494575,5741,040,2322M3518GSM1266839
OBD03 SeedlingSBSsRNA2,624,702987,897504,662588,7582M3018GSM1266840
BDI04 Leaf 1SBSsRNA5,207,5683,462,102930,017879,6882M3418GSM1266841
BDI09 Leaf 2SBSsRNA7,027,2463,937,648245,8561,413,7012M3518GSM1266842
BDI06 StemSBSsRNA3,855,5372,962,2011,411,970255,1262M3418GSM1266843
OBD02 Leaf and stemSBSsRNA3,603,5811,498,933699,716845,6972M3018GSM1266844
BDI02 Shoot control for stressSBSsRNA2,494,8491,484,598759,440506,5412M3418GSM1266845
BDI03 Drought-stressed shootSBSsRNA1,351,288719,269316,861327,4342M3418GSM1266846
BDI17 Salt-stressed shootSBSsRNA8,498,0426,092,1291,504,9791,232,2222M3418GSM1266847
BDI01 Cold-stressed shootSBSsRNA722,947409,271239,511132,3562M3418GSM1266848
BDI18 Heat-stressed shootSBSsRNA8,861,6086,431,7562,014,933957,1182M3418GSM1266849
BDI19 Submergence-stressed shootSBSsRNA9,421,1257,016,3613,007,480611,3452M3418GSM1266850
BDI15 Shoot control for low phosphateSBSsRNA11,491,9887,509,9672,043,5312,050,1442M3418GSM1266851
BDI16 Phosphate-starved shootSBSsRNA12,405,2068,377,3762,109,8692,165,5652M3418GSM1266852
OBD04 Pooled StressesSBSsRNA2,531,2781,247,734551,157524,7612M3018GSM1266853



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".