Arabidopsis Small RNA Library Information

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Code Title Technology Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
Max.
Len. of
Reads
Min.
Len. of
Reads
GEO
Accession
Number
Leaf_WT_1 Total RNA from WT Leaf Rep 1SBS36,378,67520,744,1903,003,0975,162,77310M3410GSM3147536
Leaf_WT_2 Total RNA from WT Leaf Rep 2SBS12,686,9605,884,1021,450,9812,902,76110M3410GSM3147537
Leaf_WT_3 Total RNA from WT Leaf Rep 3SBS20,029,3119,904,1982,173,0995,457,86910M3410GSM3147538
Sprn_Mock_1_2_10 Apoplast RNA from WT Leaf Rep 1SBS31,760,7427,066,1841,975,36314,491,33810M3410GSM3147539
Sprn_Mock_2_2_10 Apoplast RNA from WT Leaf Rep 2SBS18,609,6921,211,172617,14110,048,99310M3410GSM3147540
Sprn_Mock_3_2_10 Apoplast RNA from WT Leaf Rep 3SBS17,260,237243,142114,93311,619,05710M3410GSM3147541
EV_Mock_1_2_10 EV RNA from WT Leaf Rep 1SBS7,840,2443,315,540286,3491,004,08710M3410GSM3147542
EV_Mock_2_2_10 EV RNA from WT Leaf Rep 2SBS20,027,0512,978,7731,151,3097,042,96010M3410GSM3147543
EV_Mock_3_2_10 EV RNA from WT Leaf Rep 3SBS15,595,0655,482,265494,1062,842,00810M3410GSM3147544
EV_27 Total RNA from dcl234 mutant leaf replicate 1SBS76,359,13428,126,8794,063,37719,290,34410M3410GSM3377800
EV_28 Apoplast from dcl234 mutant replicate 1SBS35,184,0381,953,853715,88617,836,62110M3410GSM3377802
EV_29 EVs from dcl234 mutant replicate 1SBS18,283,5034,520,821585,6093,172,86610M3410GSM3377804
EV_30 Total RNA from dcl234 mutant leaf replicate 2SBS33,066,53910,864,0821,982,9609,576,65610M3410GSM3377801
EV_31 Apoplast from dcl234 mutant replicate 2SBS27,821,7753,419,1861,089,69214,360,76010M3410GSM3377803
EV_32 EVs from dcl234 mutant replicate 2SBS18,136,6964,555,627516,2723,481,81210M3410GSM3377805
EVs_B05_Rep1 Arabidopsis sRNA in extracellular vesicles with Botrytis cinerea protoplasts rep 1SBS69,479,1703,855,095552,40734,405,67710M3410SRR6667528
EVs_B05_Rep2 Arabidopsis sRNA in extracellular vesicles with Botrytis cinerea protoplasts rep 2SBS87,465,3932,306,724636,35776,680,40610M3410SRR6667523
EVs_B05_Rep3 Arabidopsis sRNA in extracellular vesicles with Botrytis cinerea protoplasts rep 3SBS30,614,1701,169,522202,94827,645,44410M3410SRR6667522
EVs_MOCK_Rep1 Arabidopsis sRNA in extracellular vesicles rep 1SBS76,924,5425,586,467608,68243,755,35310M3410SRR6667527
EVs_MOCK_Rep2 Arabidopsis sRNA in extracellular vesicles rep 2SBS77,756,5845,882,866760,99464,971,46710M3410SRR6667526
EVs_MOCK_Rep3 Arabidopsis sRNA in extracellular vesicles rep 3SBS55,290,3373,146,965123,81449,095,67810M3410SRR6667529
TOTAL_B05_Rep3 Arabidopsis sRNA in Botrytis cinerea protoplast rep 3SBS55,622,0179,647,426807,63338,095,75010M3410SRR6667536
TOTAL_B05_Rep1 Arabidopsis sRNA in Botrytis cinerea protoplast rep 1SBS45,654,8627,584,531765,03832,589,04510M3410SRR6667520
TOTAL_B05_Rep2 Arabidopsis sRNA in Botrytis cinerea protoplast rep 2SBS60,905,78410,095,707336,54643,137,52610M3410SRR6667537
TOTAL_MOCK_Rep1 Arabidopsis total sRNA rep 1SBS52,840,06810,632,761822,57336,220,37610M3410SRR6667525
TOTAL_MOCK_Rep2 Arabidopsis total sRNA rep 2SBS56,210,26111,526,5591,033,38937,703,09210M3410SRR6667524
TOTAL_MOCK_Rep3 Arabidopsis total sRNA rep 3SBS56,658,29911,111,5831,210,04138,812,29410M3410SRR6667521



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".
* The number of genomic-matches per small RNA ("hits") has been capped in this database at the following maximum: 50