Bread Wheat RNA-seq
Home / Basic Queries
Other Queries
miRNA Abundances
Chromosome Viewer
Bulk Loci Query
PHAS Loci
Multi-DB Query
Library Information
Analysis Apps
miRNA Tools
Resources
FAQs & Help
Publications
Links
JSON Web Services
Lists of PHAS Loci
About Us
Contact & Credits
Meyers Lab
DBs for Same Genome
Wheat RNA-seq - Anther
Wheat Small RNA
Wheat Small RNA - Anther
Bread Wheat RNA-seq Analysis
The basic information for the gene or region you select may be displayed below.
New Search
Control Panel
Legend
JSON Data
Library Abundances
Interactive View
Start a new gene search
Gene ID:
Model # (optional):
Padding at each end:
nt
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new coordinate search
Select chromosome or contig
Chr 1A (598660471 bp)
Chr 1B (700547350 bp)
Chr 1D (498638509 bp)
Chr 2A (787782082 bp)
Chr 2B (812755788 bp)
Chr 2D (656544405 bp)
Chr 3A (754128162 bp)
Chr 3B (851934019 bp)
Chr 3D (619618552 bp)
Chr 4A (754227511 bp)
Chr 4B (673810255 bp)
Chr 4D (518332611 bp)
Chr 5A (713360525 bp)
Chr 5B (714805278 bp)
Chr 5D (569951140 bp)
Chr 6A (622669697 bp)
Chr 6B (731188232 bp)
Chr 6D (495380293 bp)
Chr 7A (744491536 bp)
Chr 7B (764081788 bp)
Chr 7D (642921167 bp)
Unmapped BAC Regions (351582993 bp)
Start:
End:
Padding at each end:
nt Mark the unpadded region:
yes
no
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new cluster search
A cluster ID is of the format 'WHEAT_IWGSC2_1.[chr_id].[start].[length]'.
Cluster ID:
Size (ignore the size specified in cluster ID):
250 bp
500 bp
1 kb
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X