Poplar Small RNA
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Poplar small RNA Analysis
The basic information for the gene or region you select may be displayed below.
New Search
Control Panel
Legend
JSON Data
Library Abundances
Interactive View
Start a new gene search
Gene ID:
Model # (optional):
Padding at each end:
nt
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new coordinate search
Select chromosome or contig
Chr 1 (50495391 bp)
Chr 2 (25263035 bp)
Chr 3 (21816808 bp)
Chr 4 (24267051 bp)
Chr 5 (25890704 bp)
Chr 6 (27912125 bp)
Chr 7 (15610913 bp)
Chr 8 (19465461 bp)
Chr 9 (12948742 bp)
Chr 10 (22580532 bp)
Chr 11 (18501271 bp)
Chr 12 (15760346 bp)
Chr 13 (16320717 bp)
Chr 14 (18920894 bp)
Chr 15 (15278577 bp)
Chr 16 (14494361 bp)
Chr 17 (16080358 bp)
Chr 18 (16958300 bp)
Chr 19 (15942145 bp)
Unmapped BAC Regions (40340131 bp)
Start:
End:
Padding at each end:
nt Mark the unpadded region:
yes
no
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new cluster search
A cluster ID is of the format 'POPLAR_JGI3.[chr_id].[start].[length]'.
Cluster ID:
Size (ignore the size specified in cluster ID):
250 bp
500 bp
1 kb
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X