Grape Small RNA - GxE
Home / Basic Queries
Other Queries
miRNA Abundances
Chromosome Viewer
Bulk Loci Query
PHAS Loci
Phasing Analysis
Multi-DB Query
Library Information
Analysis Apps
miRNA Tools
Target Prediction
miRNA Similarity
Resources
FAQs & Help
Publications
Links
JSON Web Services
Lists of PHAS Loci
About Us
Contact & Credits
Meyers Lab
DBs for Same Genome
Small RNA - Atlas
Grape small RNA Analysis
The basic information for the gene or region you select may be displayed below.
New Search
Control Panel
Legend
JSON Data
Library Abundances
Interactive View
Start a new gene search
Gene ID:
Model # (optional):
Padding at each end:
nt
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new coordinate search
Select chromosome or contig
Chr 1 (23037639 bp)
Chr 2 (18779844 bp)
Chr 3 (19341862 bp)
Chr 4 (23867706 bp)
Chr 5 (25021643 bp)
Chr 6 (21508407 bp)
Chr 7 (21026613 bp)
Chr 8 (22385789 bp)
Chr 9 (23006712 bp)
Chr 10 (18140952 bp)
Chr 11 (19818926 bp)
Chr 12 (22702307 bp)
Chr 13 (24396255 bp)
Chr 14 (30274277 bp)
Chr 15 (20304914 bp)
Chr 16 (22053297 bp)
Chr 17 (17126926 bp)
Chr 18 (29360087 bp)
Chr 19 (24021853 bp)
chrUn (43154196 bp)
chr1random (568933 bp)
chr3random (1220746 bp)
chr4random (76237 bp)
chr5random (421237 bp)
chr7random (1447032 bp)
chr9random (487831 bp)
chr10random (789605 bp)
chr11random (282498 bp)
chr12random (1566225 bp)
chr13random (3268264 bp)
chr16random (740079 bp)
chr17random (829735 bp)
chr18random (5170003 bp)
Start:
End:
Padding at each end:
nt Mark the unpadded region:
yes
no
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new cluster search
A cluster ID is of the format 'GRAPE_IGGP12Xv1.[chr_id].[start].[length]'.
Cluster ID:
Size (ignore the size specified in cluster ID):
250 bp
500 bp
1 kb
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X