Arabidopsis Small RNA - hen1
Home / Basic Queries
Other Queries
miRNA Abundances
Chromosome Viewer
Bulk Loci Query
PHAS Loci
Phasing Analysis
Multi-DB Query
Library Information
Analysis Apps
miRNA Tools
Target Prediction
miRNA Similarity
Resources
FAQs & Help
Publications
Links
JSON Web Services
Lists of PHAS Loci
About Us
Contact & Credits
Meyers Lab
DBs for Same Genome
PARE
PARE - FBW
PARE - xrn4
RNA-seq
RNA-seq - 2
RNA-seq - xrn4
Small RNA
Small RNA - 2
Small RNA - 3
Small RNA - EV
Small RNA - FBW
MetC-seq
Arabidopsis small RNA Analysis
The basic information for the gene or region you select may be displayed below.
New Search
Control Panel
Legend
JSON Data
Library Abundances
Interactive View
Start a new gene search
Gene ID:
Model # (optional):
Padding at each end:
nt
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new coordinate search
Select chromosome or contig
Chr 1 (30427671 bp)
Chr 2 (19698289 bp)
Chr 3 (23459830 bp)
Chr 4 (18585056 bp)
Chr 5 (26975502 bp)
Chloroplast Genome (154478 bp)
Mitochondrial Genome (366924 bp)
Start:
End:
Padding at each end:
nt Mark the unpadded region:
yes
no
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new cluster search
A cluster ID is of the format 'AT_TAIR10.[chr_id].[start].[length]'.
Cluster ID:
Size (ignore the size specified in cluster ID):
250 bp
500 bp
1 kb
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X