Apple Small RNA
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Apple small RNA Analysis
The basic information for the gene or region you select may be displayed below.
New Search
Control Panel
Legend
JSON Data
Library Abundances
Interactive View
Start a new gene search
Gene ID:
Model # (optional):
Padding at each end:
nt
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new coordinate search
Select chromosome or contig
Chr 1 (36084770 bp)
Chr 2 (40172906 bp)
Chr 3 (39907702 bp)
Chr 4 (25412026 bp)
Chr 5 (37603955 bp)
Chr 6 (30670535 bp)
Chr 7 (31181134 bp)
Chr 8 (35800839 bp)
Chr 9 (37514189 bp)
Chr 10 (38388735 bp)
Chr 11 (40097135 bp)
Chr 12 (36276390 bp)
Chr 13 (39686181 bp)
Chr 14 (34156359 bp)
Chr 15 (55775544 bp)
Chr 16 (23462993 bp)
Chr 17 (27122625 bp)
Chloroplast Genome (160068 bp)
Mitochondrial Genome (396947 bp)
Start:
End:
Padding at each end:
nt Mark the unpadded region:
yes
no
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new cluster search
A cluster ID is of the format 'APPLE_GDR1.[chr_id].[start].[length]'.
Cluster ID:
Size (ignore the size specified in cluster ID):
250 bp
500 bp
1 kb
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X