Ustilago RNA-seq Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
Max.
Len. of
Reads
Min.
Len. of
Reads
GEO
Accession
Number
F_SG200a maize fertile anthers, 0.5/0.6 mm, infected with U. maydis SG200, rep #1SBS32,134,562331,325190,9860400K5018GSM2947799
F_SG200b maize fertile anthers, 0.5/0.6 mm, infected with U. maydis SG200, rep #2SBS29,224,5736,5919680400K5018GSM2947800
F_SG200c maize fertile anthers, 0.5/0.6 mm, infected with U. maydis SG200, rep #3SBS33,196,0888,4583,6180400K5018GSM2947801
F_SG200d maize fertile anthers, 0.5/0.6 mm, infected with U. maydis SG200, rep #4SBS31,217,574138,20870,9610400K5018GSM2947802
mac1_SG200a mac1 maize anthers, 0.5/0.6 mm, infected with U. maydis SG200, rep #1SBS27,410,961578,001294,1340400K5018GSM2947803
mac1_SG200b mac1 maize anthers, 0.5/0.6 mm, infected with U. maydis SG200, rep #2SBS31,648,782826,418435,1450400K5018GSM2947804
mac1_SG200mac1a mac1 maize anthers, 0.5/0.6 mm, infected with MAC1 expressing U. maydis SG200, rep #1SBS37,257,954593,044268,8150400K5018GSM2947805
mac1_SG200mac1b mac1 maize anthers, 0.5/0.6 mm, infected with MAC1 expressing U. maydis SG200, rep #2SBS34,249,963604,347331,4990400K5018GSM2947806
mac1_SG200mac1c mac1 maize anthers, 0.5/0.6 mm, infected with MAC1 expressing U. maydis SG200, rep #3SBS34,578,345423,693225,7230400K5018GSM2947807
mac1_SG200mac1d mac1 maize anthers, 0.5/0.6 mm, infected with MAC1 expressing U. maydis SG200, rep #4SBS32,455,672580,367200,9920400K5018GSM2947808



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".