Ae. tauschii RNA-seq Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Library Type Total
Sequences		 Genome
Matched
Reads*		 Distinct
Genome
Matched
Reads*		 t/r/sn/snoRNA
Matched
Reads		 Norm.
Base
Value		 Max.
Len. of
Reads		 Min.
Len. of
Reads		 GEO
Accession
Number
BGI_leaf5 Leaf 5SBSRNAseq34,511,21728,742,6807,201,5254,378,66530M5018SRX209406
BGI_pistil1 Pistil 1SBSRNAseq64,814,93158,603,0998,005,511449,91330M5018SRX209407
BGI_root3 Root 3SBSRNAseq31,658,16927,578,7509,112,6741,038,03830M5018SRX209410
BGI_root4 Root 4SBSRNAseq55,726,38447,943,99715,616,7991,234,67030M5018SRX209411
BGI_seed1 Seed 1SBSRNAseq25,738,73423,079,7888,553,075735,18030M5018SRX209412
BGI_seed2 Seed 2SBSRNAseq21,163,05219,085,6546,388,435470,08030M5018SRX209413
BGI_seed3 Seed 3SBSRNAseq55,403,92549,100,91613,914,1091,224,58630M5018SRX209414
BGI_sheath1 Sheath 1SBSRNAseq15,904,92913,690,0287,137,984410,15530M5018SRX209415
BGI_sheath2 Sheath 2SBSRNAseq25,316,98022,411,6869,061,192683,90330M5018SRX209416
BGI_sheath3 Sheath 3SBSRNAseq16,226,05914,359,1525,975,655433,30230M5018SRX209417
BGI_sheath4 Sheath 4SBSRNAseq33,866,30630,891,3309,488,1531,560,54830M5018SRX209418
BGI_spike1 Spike 1SBSRNAseq30,975,59427,896,08010,220,558959,44730M5018SRX209419
BGI_spike2 Spike 2SBSRNAseq19,398,30117,354,1446,290,981583,61930M5018SRX209420
BGI_spike3 Spike 3SBSRNAseq51,710,35045,299,01715,032,8051,626,40930M5018SRX209421
BGI_stamen1 Stamen 1SBSRNAseq45,029,31740,178,85810,168,788827,43730M5018SRX209422
BGI_stem1 Stem 1SBSRNAseq31,795,31627,487,8959,892,3661,462,11430M5018SRX209423
BGI_stem2 Stem 2SBSRNAseq22,988,58420,330,0936,699,7361,019,10130M5018SRX209424
BGI_stem3 Stem 3SBSRNAseq67,384,35158,897,64719,594,2561,563,40830M5018SRX209425



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".