Spirodela Small RNA Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
Max.
Len. of
Reads
Min.
Len. of
Reads
GEO
Accession
Number
SpoC1 Spirodela polyrhiza cold treatment overnight 0*C-1 sRNASOLiD340,135222,12019,428118,0151M2616
SpoC2 Spirodela polyrhiza cold treatment overnight 0*C-2 sRNASOLiD1,192,666334,26922,302858,3971M2616
SpoC3 Spirodela polyrhiza cold treatment overnight 0*C-3 sRNASOLiD1,791,034588,99840,8331,202,0361M2616
SpoHot1 Spirodela polyrhiza heat treatment 37*C-1 sRNASOLiD1,606,9751,372,13532,180234,8401M2616
SpoHot2 Spirodela polyrhiza heat treatment 37*C-2 sRNASOLiD1,281,1201,114,71322,222166,4071M2616
SpoHot3 Spirodela polyrhiza heat treatment 37*C-3 sRNASOLiD1,139,829960,24526,616179,5841M2616
SpoABA1 Spirodeal polyrhiza abscisic acid -1 sRNASOLiD1,989,6111,573,19646,179416,4151M2616
SpoABA2 Spirodeal polyrhiza abscisic acid -2 sRNASOLiD344,840184,33418,632160,5061M2616
SpoABA3 Spirodeal polyrhiza abscisic acid -3 sRNASOLiD3,655,8191,344,38853,5522,311,4311M2616
SpoCtrl1 Spirodela polyrhiza control condition-1 sRNASOLiD380,928209,40715,529170,9741M2616
SpoCtrl2 Spirodela polyrhiza control condition-2 sRNASOLiD759,601310,36121,775449,2401M2616
SpoCtrl3 Spirodela polyrhiza control condition-3 sRNASOLiD83,22443,8254,58539,3991M2616
SpoCu1 Spirodela polyrhiza copper chloride 4 days -1 sRNASOLiD1,064,223966,89214,27097,3311M2616
SpoCu2 Spirodela polyrhiza copper chloride 4 days -2 sRNASOLiD1,794,295727,99449,3981,066,3011M2616
SpoCu3 Spirodela polyrhiza copper chloride 4 days -1 sRNASOLiD1,248,064314,91133,435933,1531M2616
SpoKin1 Spirodela polyrhiza Kinetin -1 sRNASOLiD3,595,0112,443,07770,6881,151,9341M2616
SpoKin2 Spirodela polyrhiza Kinetin -2 sRNASOLiD1,271,825503,45944,314768,3661M2616
SpoKin3 Spirodela polyrhiza Kinetin -3 sRNASOLiD700,487452,49820,188247,9891M2616
SpoNO1 Spirodela polyrhiza nitrate -1 sRNASOLiD2,826,3512,065,45550,719760,8961M2616
SpoNO2 Spirodela polyrhiza nitrate -2 sRNASOLiD2,051,8621,156,74146,754895,1211M2616
SpoNO3 Spirodela polyrhiza nitrate -3 sRNASOLiD634,269528,19816,725106,0711M2616
SpoSu1 Spirodela polyrhiza sucrose -1 sRNASOLiD513,175237,95915,843275,2161M2616
SpoSu2 Spirodela polyrhiza sucrose -2 sRNASOLiD1,014,005788,36517,053225,6401M2616
SpoSu3 Spirodela polyrhiza sucrose -3 sRNASOLiD1,000,294739,15113,956261,1431M2616
Spirodela1 Spirodela polyrhiza, cultured fronds and roots.SBS24,459,9866,805,511489,1319,031,6981M3418GSM1331603



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".