Spirodela Small RNA Library Information

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Code Title Technology Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
Max.
Len. of
Reads
Min.
Len. of
Reads
GEO
Accession
Number
SpoC1 Spirodela polyrhiza cold treatment overnight 0*C-1 sRNASOLiD340,135222,12019,428118,0153M2616SAMN09281479
SpoC2 Spirodela polyrhiza cold treatment overnight 0*C-2 sRNASOLiD1,192,666334,26922,302858,3973M2616SAMN09281480
SpoC3 Spirodela polyrhiza cold treatment overnight 0*C-3 sRNASOLiD1,791,034588,99840,8331,202,0363M2616SAMN09281481
SpoHot1 Spirodela polyrhiza heat treatment 37*C-1 sRNASOLiD1,606,9751,372,13532,180234,8403M2616SAMN09281482
SpoHot2 Spirodela polyrhiza heat treatment 37*C-2 sRNASOLiD1,281,1201,114,71322,222166,4073M2616SAMN09281483
SpoHot3 Spirodela polyrhiza heat treatment 37*C-3 sRNASOLiD1,139,829960,24526,616179,5843M2616SAMN09281484
SpoABA1 Spirodeal polyrhiza abscisic acid -1 sRNASOLiD1,989,6111,573,19646,179416,4153M2616SAMN09281485
SpoABA2 Spirodeal polyrhiza abscisic acid -2 sRNASOLiD344,840184,33418,632160,5063M2616SAMN09281486
SpoABA3 Spirodeal polyrhiza abscisic acid -3 sRNASOLiD3,655,8191,344,38853,5522,311,4313M2616SAMN09281487
SpoCtrl1 Spirodela polyrhiza control condition-1 sRNASOLiD380,928209,40715,529170,9743M2616SAMN09281476
SpoCtrl2 Spirodela polyrhiza control condition-2 sRNASOLiD759,601310,36121,775449,2403M2616SAMN09281477
SpoCtrl3 Spirodela polyrhiza control condition-3 sRNASOLiD83,22443,8254,58539,3993M2616SAMN09281478
SpoCu1 Spirodela polyrhiza copper chloride 4 days -1 sRNASOLiD1,064,223966,89214,27097,3313M2616SAMN09281488
SpoCu2 Spirodela polyrhiza copper chloride 4 days -2 sRNASOLiD1,794,295727,99449,3981,066,3013M2616SAMN09281489
SpoCu3 Spirodela polyrhiza copper chloride 4 days -1 sRNASOLiD1,248,064314,91133,435933,1533M2616SAMN09281490
SpoKin1 Spirodela polyrhiza Kinetin -1 sRNASOLiD3,595,0112,443,07770,6881,151,9343M2616SAMN09281491
SpoKin2 Spirodela polyrhiza Kinetin -2 sRNASOLiD1,271,825503,45944,314768,3663M2616SAMN09281492
SpoKin3 Spirodela polyrhiza Kinetin -3 sRNASOLiD700,487452,49820,188247,9893M2616SAMN09281493
SpoNO1 Spirodela polyrhiza nitrate -1 sRNASOLiD2,826,3512,065,45550,719760,8963M2616SAMN09281494
SpoNO2 Spirodela polyrhiza nitrate -2 sRNASOLiD2,051,8621,156,74146,754895,1213M2616SAMN09281495
SpoNO3 Spirodela polyrhiza nitrate -3 sRNASOLiD634,269528,19816,725106,0713M2616SAMN09281496
SpoSu1 Spirodela polyrhiza sucrose -1 sRNASOLiD513,175237,95915,843275,2163M2616SAMN09281497
SpoSu2 Spirodela polyrhiza sucrose -2 sRNASOLiD1,014,005788,36517,053225,6403M2616SAMN09281498
SpoSu3 Spirodela polyrhiza sucrose -3 sRNASOLiD1,000,294739,15113,956261,1433M2616SAMN09281499
Spirodela1 Spirodela polyrhiza, cultured fronds and roots.SBS24,459,9866,805,511489,1319,031,6983M3418GSM1331603
Sp_leaf Spirodela polyrhiza leafSBS1,900,832368,64374,929344,6023M3418
Spiro_7498_1 Spiro 7498 rep1SBS41,420,45416,372,163494,2749,947,4483M3418
Spiro_7498_2 Spiro 7498 rep2SBS46,951,87215,168,473728,77612,324,3153M3418
Spiro_9509_1 Spiro 9509 rep1SBS21,254,4968,268,292269,3506,070,6683M3418
Spiro_9509_2 Spiro 9509 rep2SBS21,549,3429,344,909236,7445,112,6893M3418



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".