Rice ChIP Library Information

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Code Title Technology Library Type Total
Sequences		 Genome
Matched
Reads*		 Distinct
Genome
Matched
Reads*		 t/r/sn/snoRNA
Matched
Reads		 Norm.
Base
Value		 Max.
Len. of
Reads		 Min.
Len. of
Reads		 GEO
Accession
Number
H3K27m3_9N ChIP-seq from F1(9311xNipponbare) on H3k27m3, shoots of seedlingsSBSChIP14,214,7206,714,9335,891,61725,0212M3018GSM489086
H3K27m3_9 ChIP-seq from 9311 on H3K27m3, shoots of seedlingsSBSChIP10,590,8014,346,7783,982,19817,7782M3018GSM489084
H3K27m3_N9 ChIP-seq from F1(Nipponbarex9311) on H3k27m3, shoots of seedlingsSBSChIP14,375,2666,319,8825,610,86629,2652M3018GSM489085
H3K27m3_N ChIP-seq from Nipponbare on H3K27m3, shoots of seedlingsSBSChIP7,821,1283,965,9903,721,18613,2822M3018GSM489083
H3K4m3_9N ChIP-seq from F1(9311xNipponbare) on H3k4m3, shoots of seedlingsSBSChIP15,036,9517,504,4966,455,21817,6462M3018GSM489078
H3K4m3_9 ChIP-seq from 9311 on H3K4m3, shoots of seedlingsSBSChIP11,033,4374,975,0954,398,7739,7212M3018GSM489076
H3K4m3_N9 ChIP-seq from F1(Nipponbarex9311) on H3k4m3, shoots of seedlingsSBSChIP13,294,8176,434,9125,617,72815,6422M3018GSM489077
H3K4m3_N ChIP-seq from Nipponbare on H3K4m3, shoots of seedlingsSBSChIP7,302,1083,867,6033,615,0809,3662M3018GSM489075
H3K9ac_9N ChIP-seq from F1(9311xNipponbare) on H3k9ac, shoots of seedlingsSBSChIP13,884,3875,981,3185,204,33579,1802M3018GSM489082
H3K9ac_9 ChIP-seq from 9311 on H3K9ac, shoots of seedlingsSBSChIP13,666,8215,920,7445,094,33781,1402M3018GSM489080
H3K9ac_N9 ChIP-seq from F1(Nipponbarex9311) on H3k9ac, shoots of seedlingsSBSChIP17,190,1168,388,9877,106,571113,9162M3018GSM489081
H3K9ac_N ChIP-seq from Nipponbare on H3K9ac, shoots of seedlingsSBSChIP13,985,2646,716,6396,108,001108,5362M3018GSM489079
H3K27me3 H3K27me3_ChIPSeqSBSChIP10,761,9865,585,3344,189,05636,7376M5018SRX040548
inputDNA inputDNASBSChIP11,732,5418,237,6477,137,417140,4506M5018SRX040549



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".