Rice RNA-seq Library Information

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Code Title Technology Library Type Total
Sequences		 Genome
Matched
Reads*		 Distinct
Genome
Matched
Reads*		 t/r/sn/snoRNA
Matched
Reads		 Norm.
Base
Value		 Max.
Len. of
Reads		 Min.
Len. of
Reads		 GEO
Accession
Number
1d_LT_s6_r1_RNAs ago1d anther stage 4-6 cold stress bio rep 1NEBNext_UltraRNAseq48,385,78744,725,66814,458,753579,05240M5018GSM5742678
1d_LT_s6_r2_RNA ago1d anther stage 4-6 cold stress bio rep 2NEBNext_UltraRNAseq43,842,93240,800,25014,160,456408,94040M5023GSM5742679
1d_LT_s6_r3_RNA ago1d anther stage 4-6 cold stress bio rep 3NEBNext_UltraRNAseq38,849,82635,795,80613,253,100495,70940M5023GSM5742680
1d_LT_s8_r1_RNA ago1d anther stage 7-8 cold stress bio rep 1NEBNext_UltraRNAseq44,621,43340,929,61513,501,054776,22340M5019GSM5742690
1d_LT_s8_r2_RNA ago1d anther stage 7-8 cold stress bio rep 2NEBNext_UltraRNAseq51,349,69047,195,04814,651,445837,09340M5018GSM5742691
1d_LT_s8_r3_RNA ago1d anther stage 7-8 cold stress bio rep 3NEBNext_UltraRNAseq44,003,01540,383,06313,719,818718,54040M5018GSM5742692
1d_LT_s9_r1_RNA ago1d anther stage 9 cold stress bio rep 1NEBNext_UltraRNAseq44,455,43141,085,60813,443,316502,24740M5018GSM5742702
1d_LT_s9_r2_RNA ago1d anther stage 9 cold stress bio rep 2NEBNext_UltraRNAseq45,815,25541,236,61813,210,2991,447,06540M5018GSM5742703
1d_LT_s9_r3_RNA ago1d anther stage 9 cold stress bio rep 3NEBNext_UltraRNAseq48,054,14544,269,88014,013,845601,90940M5018GSM5742704
1d_NT_s6_r1_RNA ago1d anther stage 4-6 normal temperature bio rep 1NEBNext_UltraRNAseq49,801,51645,859,06012,204,671272,29740M5018GSM5742681
1d_NT_s6_r2_RNA ago1d anther stage 4-6 normal temperature bio rep 2NEBNext_UltraRNAseq44,583,32341,266,11214,300,878532,95240M5018GSM5742682
1d_NT_s6_r3_RNA ago1d anther stage 4-6 normal temperature bio rep 3NEBNext_UltraRNAseq45,074,78841,907,08414,293,256442,75540M5018GSM5742683
1d_NT_s8_r1_RNA ago1d anther stage 7-8 normal temperature bio rep 1NEBNext_UltraRNAseq47,391,04743,856,01213,937,306593,93440M5018GSM5742693
1d_NT_s8_r2_RNA ago1d anther stage 7-8 normal temperature bio rep 2NEBNext_UltraRNAseq51,853,89447,841,14215,002,244789,16040M5018GSM5742694
1d_NT_s8_r3_RNA ago1d anther stage 7-8 normal temperature bio rep 3NEBNext_UltraRNAseq44,325,48440,704,29512,301,992521,99940M5018GSM5742695
1d_NT_s9_r1_RNA ago1d anther stage 9 normal temperature bio rep 1NEBNext_UltraRNAseq42,787,75739,002,85413,047,183779,28440M5018GSM5742705
1d_NT_s9_r2_RNA ago1d anther stage 9 normal temperature bio rep 2NEBNext_UltraRNAseq49,817,21545,875,39214,708,291500,82540M5018GSM5742706
1d_NT_s9_r3_RNA ago1d anther stage 9 normal temperature bio rep 3NEBNext_UltraRNAseq49,356,46945,715,75414,343,920481,79240M5018GSM5742707
WT_LT_s6_r1_RNA WT anther stage 4-6 cold stress bio rep 1NEBNext_UltraRNAseq43,532,94634,748,88112,340,6806,052,06240M5018GSM5742684
WT_LT_s6_r2_RNA WT anther stage 4-6 cold stress bio rep 2NEBNext_UltraRNAseq40,673,19437,451,95213,101,485612,11040M5018GSM5742685
WT_LT_s6_r3_RNA WT anther stage 4-6 cold stress bio rep 3NEBNext_UltraRNAseq45,463,12042,508,87314,556,587220,24440M5018GSM5742686
WT_LT_s8_r1_RNA WT anther stage 7-8 cold stress bio rep 1NEBNext_UltraRNAseq42,922,82339,636,98512,896,412704,39040M5018GSM5742696
WT_LT_s8_r2_RNA WT anther stage 7-8 cold stress bio rep 2NEBNext_UltraRNAseq41,414,74738,379,97713,219,149554,89140M5018GSM5742697
WT_LT_s8_r3_RNA WT anther stage 7-8 cold stress bio rep 3NEBNext_UltraRNAseq47,302,25243,710,03813,881,854512,16840M5018GSM5742698
WT_LT_s9_r1_RNA WT anther stage 9 cold stress bio rep 1NEBNext_UltraRNAseq48,387,68244,495,87213,433,735744,70840M5023GSM5742708
WT_LT_s9_r2_RNA WT anther stage 9 cold stress bio rep 2NEBNext_UltraRNAseq42,860,09239,768,28513,103,706292,05640M5018GSM5742709
WT_LT_s9_r3_RNA WT anther stage 9 cold stress bio rep 3NEBNext_UltraRNAseq42,933,25739,864,69113,567,387444,06640M5023GSM5742710
WT_NT_s6_r1_RNA WT anther stage 4-6 normal temperature bio rep 1NEBNext_UltraRNAseq41,919,24339,139,05013,496,287423,75940M5018GSM5742687
WT_NT_s6_r2_RNA WT anther stage 4-6 normal temperature bio rep 2NEBNext_UltraRNAseq41,661,20538,629,37713,223,144461,14240M5018GSM5742688
WT_NT_s6_r3_RNA WT anther stage 4-6 normal temperature bio rep 3NEBNext_UltraRNAseq46,602,96441,947,27414,769,968639,28640M5021GSM5742689
WT_NT_s8_r1_RNA WT anther stage 7-8 normal temperature bio rep 1NEBNext_UltraRNAseq42,917,28839,794,62013,384,260512,15940M5018GSM5742699
WT_NT_s8_r2_RNA WT anther stage 7-8 normal temperature bio rep 2NEBNext_UltraRNAseq45,732,07442,260,93213,492,633577,18640M5018GSM5742700
WT_NT_s8_r3_RNA WT anther stage 7-8 normal temperature bio rep 3NEBNext_UltraRNAseq45,530,33442,013,16213,459,625679,65040M5018GSM5742701
WT_NT_s9_r1_RNA WT anther stage 9 normal temperature bio rep 1NEBNext_UltraRNAseq47,062,89343,870,47913,888,182260,10240M5018GSM5742711
WT_NT_s9_r2_RNA WT anther stage 9 normal temperature bio rep 2NEBNext_UltraRNAseq48,370,49144,559,39113,633,394799,49740M5018GSM5742712
WT_NT_s9_r3_RNA WT anther stage 9 normal temperature bio rep 3NEBNext_UltraRNAseq46,976,76243,057,08013,331,868709,24040M5018GSM5742713



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".