orchid_sRNA Next-Gen DB

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code	Title	Technology	Library Type	Total Sequences	Genome Matched Reads*	Distinct Genome Matched Reads*	Norm. Base Value	Max. Len. of Reads	Min. Len. of Reads	GEO Accession Number
Orch_leaf	Orchid, leaf, BM14-235	SBS	sRNA	31,701,861	20,440,533	7,175,661	20M	34	18	GSM4478593
Orch_col_of	Orchid, column from open flower, BM14-237	SBS	sRNA	39,086,824	24,791,433	9,411,479	20M	34	18	GSM4478594
Orch_4wbud	Orchid, 4 mm whole buds, BM14-238	SBS	sRNA	31,169,093	21,508,470	8,082,866	20M	34	18	GSM4478526
Orch_pol_5bud	Orchid, pollinia with cap from 5 mm buds, BM14-239	SBS	sRNA	42,053,502	27,484,220	6,093,439	20M	34	18	GSM4478527
Orch_col_5bud	Orchid, column from 5 mm buds, BM14-240	SBS	sRNA	30,733,030	19,975,249	7,148,679	20M	34	18	GSM4478595
Orch_pol_7bud	Orchid, pollinia with cap from 7 mm buds, BM14-241	SBS	sRNA	38,185,299	25,564,250	5,538,941	20M	34	18	GSM4478528
Orch_col_7bud	Orchid, column from 7 mm buds, BM14-242	SBS	sRNA	34,349,471	21,786,683	8,384,527	20M	34	18	GSM4478596
Orch_fam_3bud	Orchid, floral apical meristem with <3 mm buds, BM14-243	SBS	sRNA	37,021,549	25,086,274	9,234,996	20M	34	18	GSM4478597

* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".