mt_sRNA Next-Gen DB

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code	Title	Technology	Library Type	Total Sequences	Genome Matched Reads*	Distinct Genome Matched Reads*	t/r/sn/snoRNA Matched Reads	Norm. Base Value	Max. Len. of Reads	Min. Len. of Reads	GEO Accession Number
GMA01	Glycine max Root	SBS	sRNA	3,124,689	123,777	11,666	694,593	100K	34	18	GSM769282
GMA02	Glycine max Nodule	SBS	sRNA	3,313,726	207,906	11,955	585,701	100K	34	18	GSM769283
GMA03	Glycine max Flower	SBS	sRNA	2,617,063	123,495	15,320	533,719	100K	34	18	GSM769284
GMA04	Glycine max Dev.Seed	SBS	sRNA	3,409,110	213,495	9,742	475,411	100K	34	18	GSM769285
GMA05b	Glycine max Williams 82 uninoculated Root Hair, Rep 2	SBS	sRNA	3,697,659	156,715	12,872	897,655	100K	34	18	GSM769286
GMA06b	Glycine max inoculated Root Hair, Rep 2	SBS	sRNA	1,900,537	67,656	9,554	468,390	100K	34	18	GSM769287
GMA07b	Glycine max Williams 82 inoculated Stripped Root, Rep2	SBS	sRNA	3,828,884	191,334	16,295	544,623	100K	34	18	GSM769288
PVU01	Phaseolus vulgaris Root	SBS	sRNA	3,741,114	185,588	7,681	430,232	100K	34	18	GSM769289
PVU02	Phaseolus vulgaris Flower	SBS	sRNA	3,016,787	151,765	9,504	1,131,607	100K	34	18	GSM769290
PVU03	Phaseolus vulgaris Nodule	SBS	sRNA	2,534,488	182,001	9,707	247,917	100K	34	18	GSM769291
PVU04	Phaseolus vulgaris Dev.Seed	SBS	sRNA	1,579,278	22,929	3,472	243,508	100K	34	18	GSM769292
AHY01	Arachis hypogaea Nodule	SBS	sRNA	3,687,213	81,661	13,072	482,833	100K	34	18	GSM769280
AHY02	Arachis hypogaea Flower	SBS	sRNA	4,265,433	167,848	10,328	230,154	100K	34	18	GSM769281
MSDL1	Medicago truncatula Seeding	SBS	sRNA	3,262,563	2,148,804	795,063	208,533	1M	33	18	GSM769272
MYR1	Medicago truncatula Root	SBS	sRNA	2,711,830	1,481,446	816,934	335,326	1M	33	18	GSM769273
MINF	Medicago truncatula Flower	SBS	sRNA	2,609,862	1,365,270	739,193	115,297	1M	33	18	GSM769274
MND1	Medicago truncatula Nodule	SBS	sRNA	2,272,926	864,687	518,938	396,092	1M	33	18	GSM769275
MRG1	Medicago truncatula Myc	SBS	sRNA	2,511,177	1,032,351	647,230	642,199	1M	33	18	GSM769276
MLEF	Medicago truncatula Leaf	SBS	sRNA	3,084,454	1,799,846	941,437	105,649	1M	33	18	GSM769277
MRMI1	Medicago truncatula Root Knot	SBS	sRNA	3,148,639	1,240,195	869,365	653,855	1M	33	18	GSM769278
MTR01	Medicago truncatula Dev.Seed	SBS	sRNA	2,070,927	281,093	186,352	1,278,446	1M	34	18	GSM769279
Mtrdr6_1	Medicago rdr6 mutant rep1	SBS	sRNA	9,667,227	4,492,494	1,440,676	2,790,178	1M	34	18	GSM967939
Mtrdr6_2	Medicago rdr6 mutant rep2	SBS	sRNA	11,753,914	4,011,960	1,238,239	5,166,281	1M	34	18	GSM967940
Mtrdr6_WT_1	Medicago WT control for rdr6 mutant rep1	SBS	sRNA	9,461,665	3,966,530	1,133,862	3,214,489	1M	34	18	GSM967941
Mtrdr6_WT_2	Medicago WT control for rdr6 mutant rep2	SBS	sRNA	11,224,725	4,503,185	1,514,603	3,925,041	1M	34	18	GSM967942

* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".