Magnaporthe small RNA Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Library Type Total
Sequences		 Genome
Matched
Reads*		 Distinct
Genome
Matched
Reads*		 t/r/sn/snoRNA
Matched
Reads		 Norm.
Base
Value		 Max.
Len. of
Reads		 Min.
Len. of
Reads		 GEO
Accession
Number
MgCM01 Mycelium, re-inoculated into complete medium for 16 hours.SBSsRNA11,856,6202,346,709161,590368,3015M3418GSM1059882
MgCS03 Mycelium, re-inoculated into carbon starved medium for 16 hours.SBSsRNA12,601,4782,843,344306,533423,0225M3418GSM1059883
MgMM04 Mycelium, re-inoculated into minimal medium for 16 hours.SBSsRNA12,344,5972,343,68770,601104,8825M3418GSM1059884
SRNS02 Magnaporthe mycelium, nitrogen-starved for 16 hoursSBSsRNA11,532,5962,247,893188,219310,4155M3418GSM1059885
SRPQ05 Magnaporthe mycelium, paraquat-treated for 24 hoursSBSsRNA10,175,9891,154,33196,622209,4605M3418GSM1059886
LMg0 Rice leaf, 0 hr control for Mg-treated libraries, NipponbareSBSsRNA10,424,323279,8888,68315,3585M3418GSM1059887
LMg72 Rice leaf, 72 hpi, Magnaporthe infected, NipponbareSBSsRNA8,887,347139,25713,7888,3485M3418GSM1059888
LMg96 Rice leaf, 96 hpi, Magnaporthe infected, NipponbareSBSsRNA9,629,869400,38513,34523,7515M3418GSM1059889
Wt7015 Wild type, Magnaporthe oryzae strain 70-15SBSsRNA2,991,357807,887179,29998,3025M3418
Wt7015_I Wild type, Magnaporthe oryzae strain 70-15 (I)SBSsRNA14,958,2712,931,244540,583515,4875M3418
dcl1 Mycelial tissues from targeted deletion mutant of M. oryzae Dicer-like protein1 (MGG_01541.6)SBSsRNA3,761,1291,085,179205,566139,6555M3418
dcl2 Mycelial tissues from targeted deletion mutant of M. oryzae Dicer-like protein2 (MGG_12357.6)SBSsRNA3,089,184325,856141,362236,8425M3418
dcl1_2 Mycelial tissues from targeted deletion mutant of M. oryzae Dicer-like protein1 (MGG_01541.6) and Dicer-like protein2 (MGG_12357.6)SBSsRNA1,364,061117,78546,14969,7875M3418
dcl2_1 Mycelial tissues from targeted deletion mutant of M. oryzae Dicer-like protein2 (MGG_12357.6) and Dicer-like protein1 (MGG_01541.6)SBSsRNA1,667,560172,43686,529131,4035M3418
rdrp13453 Mycelial tissues from targeted deletion mutant of M. oryzae RdRp MGG_13453.6SBSsRNA1,880,845243,941112,888128,8705M3418
rdrp02748 Mycelial tissues from targeted deletion mutant of M. oryzae RdRp MGG_02748.6SBSsRNA4,402,1931,202,669230,879178,4035M3418
rdrp06205 Mycelial tissues from targeted deletion mutant of M. oryzae RdRp MGG_06205.6SBSsRNA3,279,862701,549175,273123,2615M3418
ago01294_II Mycelial tissues from targeted deletion mutant of M. oryzae Argonaute MGG_01294IISBSsRNA37,194,88113,480,695649,419576,4855M3418
ago14873 Mycelial tissues from targeted deletion mutant of M. oryzae Argonaute MGG_14873.6SBSsRNA1,891,698446,159118,85764,5845M3418
ago13617 Mycelial tissues from targeted deletion mutant of M. oryzae Argonaute MGG_13617.6SBSsRNA1,955,585432,141115,76168,3965M3418



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".