Maize B73 small RNA Library Information

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Code Title Technology Library Type Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
Max.
Len. of
Reads
Min.
Len. of
Reads
GEO
Accession
Number
1.0Fertile_r1 maize fertile anthers, 1.0 mm, rep 1.SBSsRNA34,019,13624,145,2012,140,9704,673,54020M3418GSM1262527
1.0Fertile_r2 maize fertile anthers, 1.0 mm rep 2.SBSsRNA37,594,67826,383,6061,268,7594,508,70420M3418GSM1262538
1.0Fertile_r3 maize fertile anthers, 1.0 mm, rep 3.SBSsRNA29,761,64519,824,9223,125,2671,952,48520M3418GSM1262548
1.5Fertile_r1 maize fertile anthers, 1.5 mm, rep 1.SBSsRNA37,521,38925,727,3991,831,0015,121,01620M3418GSM1262528
1.5Fertile_r2 maize fertile anthers, 1.5 mm rep 2.SBSsRNA27,713,84018,810,7751,007,7462,404,77020M3418GSM1262539
1.5Fertile_r3 maize fertile anthers, 1.5 mm, rep 3.SBSsRNA26,530,20717,393,8302,521,475803,38320M3418GSM1262549
2.0Fertile_r1 maize fertile anthers, 2.0 mm, rep 1.SBSsRNA35,796,93725,472,9892,431,6142,724,34420M3418GSM1262529
2.0Fertile_r2 maize fertile anthers, 2.0 mm rep 2.SBSsRNA48,664,03834,195,0891,620,1643,877,34720M3418GSM1262540
2.0Fertile_r3 maize fertile anthers, 2.0 mm, rep 3.SBSsRNA23,136,15316,148,8091,805,0431,263,08320M3418GSM1262550
1.0 ms23_r1 ms23 maize anthers, line 610_2 (sterile), 1.0 mmSBSsRNA39,001,90728,390,7214,520,5273,981,97620M3418GSM2415846
1.0 ms23_r2 ms23 maize anthers, line 610_16 (sterile), 1.0 mmSBSsRNA39,915,74327,476,5813,517,4287,016,35920M3418GSM2415847
1.5 ms23_r1 ms23 maize anthers, line 610_2 (sterile), 1.5 mmSBSsRNA42,336,65327,607,2363,642,2738,160,14620M3418GSM2415848
1.5 ms23_r2 ms23 maize anthers, line 610_16 (sterile), 1.5 mmSBSsRNA39,239,15526,750,7483,859,7395,947,65120M3418GSM2415849
2.0 ms23_r1 ms23 maize anthers, line 610_2 (sterile), 2.0 mmSBSsRNA45,636,25331,739,9424,068,7676,940,35820M3418GSM2415850
2.0 ms23_r2 ms23 maize anthers, line 610_16 (sterile), 2.0 mmSBSsRNA29,803,02021,208,9053,044,6293,994,49920M3418GSM2415851
ms32F_1_0mm_r1 ms32 fertile sibling anthers, 1.0 mm, sample ZPP109-5SBSsRNA19,052,14012,473,3921,983,6011,780,83620M3418
ms32F_1_0mm_r2 ms32 fertile sibling anthers, 1.0 mm, sample ZPP112-4SBSsRNA19,824,02412,964,2692,025,0352,009,61020M3418
ms32F_1_0mm_r3 ms32 fertile sibling anthers, 1.0 mm, sample ZPP112-8SBSsRNA18,861,63811,899,5682,478,9051,311,84220M3418
ms32F_1_5mm_r1 ms32 fertile sibling anthers, 1.5 mm, sample ZPP109-5SBSsRNA30,864,91518,858,1861,966,1761,316,61120M3418
ms32F_1_5mm_r2 ms32 fertile sibling anthers, 1.5 mm, sample ZPP111-11SBSsRNA28,058,95117,640,6952,897,1362,118,77020M3418
ms32F_1_5mm_r3 ms32 fertile sibling anthers, 1.5 mm, sample ZPP112-8SBSsRNA27,833,22117,609,5472,985,5591,919,34220M3418
ms32F_2_0mm_r1 ms32 fertile sibling anthers, 2.0 mm, sample ZPP109-5SBSsRNA26,012,85816,184,4091,776,385954,55920M3418
ms32F_2_0mm_r2 ms32 fertile sibling anthers, 2.0 mm, sample ZPP111-11SBSsRNA24,458,12615,757,0951,399,157970,98620M3418
ms32F_2_0mm_r3 ms32 fertile sibling anthers, 2.0 mm, sample ZPP112-8SBSsRNA24,552,80615,616,1421,554,4031,323,28420M3418
ms32_1_0mm_r1 ms32 sterile sibling anthers, 1.0 mm, sample ZPP109-6SBSsRNA27,685,41117,327,2152,799,0742,859,36820M3418
ms32_1_0mm_r2 ms32 sterile sibling anthers, 1.0 mm, sample ZPP111-3SBSsRNA28,498,69118,059,4332,759,5682,928,84520M3418
ms32_1_0mm_r3 ms32 sterile sibling anthers, 1.0 mm, sample ZPP111-5SBSsRNA26,045,70616,424,7563,252,9242,069,76520M3418
ms32_1_5mm_r1 ms32 sterile sibling anthers, 1.5 mm, sample ZPP109-6SBSsRNA26,096,45616,070,7383,854,4251,925,96620M3418
ms32_1_5mm_r2 ms32 sterile sibling anthers, 1.5 mm, sample ZPP111-5SBSsRNA25,095,37315,761,8602,846,2512,471,15120M3418
ms32_1_5mm_r3 ms32 sterile sibling anthers, 1.5 mm, sample ZPP112-5SBSsRNA24,452,06116,037,4122,064,2922,735,62020M3418
ms32_2_0mm_r1 ms32 sterile sibling anthers, 2.0 mm, sample ZPP109-4SBSsRNA29,544,62618,498,5564,927,5342,082,63420M3418
ms32_2_0mm_r2 ms32 sterile sibling anthers, 2.0 mm, sample ZPP109-6SBSsRNA24,633,76916,111,9973,008,9642,441,65720M3418
ms32_2_0mm_r3 ms32 sterile sibling anthers, 2.0 mm, sample ZPP111-5SBSsRNA24,169,08115,199,0493,470,1122,196,34120M3418
51ms_1_0mm_1 Maize bHLH51 CRISPR, male sterile, 1.0 mm anthersSBSsRNA29,517,02819,562,8032,407,2426,123,46520M3418
51ms_1_0mm_2 Maize bHLH51 CRISPR, male sterile, 1.0 mm anthersSBSsRNA29,397,09821,011,4132,200,6415,491,22820M3418
51ms_1_5mm_1 Maize bHLH51 CRISPR, male sterile, 1.5 mm anthersSBSsRNA25,915,06218,537,7891,673,1184,721,90320M3418
51ms_1_5mm_2 Maize bHLH51 CRISPR, male sterile, 1.5 mm anthersSBSsRNA37,457,89226,975,7792,578,6404,257,71720M3418
51ms_2_0mm_1 Maize bHLH51 CRISPR, male sterile, 2.0 mm anthersSBSsRNA49,680,65937,781,2492,699,5312,309,84120M3418
51ms_2_0mm_2 Maize bHLH51 CRISPR, male sterile, 2.0 mm anthersSBSsRNA50,903,45337,009,6702,545,8011,973,68720M3418
51ms_3_0mm_1 Maize bHLH51 CRISPR, male sterile, 3.0 mm anthersSBSsRNA45,238,42531,624,2065,219,5083,511,67920M3418
51ms_3_0mm_2 Maize bHLH51 CRISPR, male sterile, 3.0 mm anthersSBSsRNA40,565,20928,849,2943,831,0233,312,79620M3418
51ms_3_0mm_3 Maize bHLH51 CRISPR, male sterile, 3.0 mm anthers, rep #3SBSsRNA16,211,38312,167,2331,000,3912,029,65920M3418
122ms_1mm_1 Maize bHLH122 CRISPR, male sterile, 1.0 mm anthersSBSsRNA40,127,55129,419,9544,125,4914,358,10220M3418
122ms_1mm_2 Maize bHLH122 CRISPR, male sterile, 1.0 mm anthersSBSsRNA36,001,06925,502,5263,929,9773,379,32220M3418
122ms_1mm_3 Maize bHLH122 CRISPR, male sterile, 1.0 mm anthers, rep #3SBSsRNA18,497,36813,436,9551,908,4271,924,53820M3418
122ms_1_5mm1 Maize bHLH122 CRISPR, male sterile, 1.5 mm anthersSBSsRNA35,807,24324,961,0723,728,5304,223,67320M3418
122ms_1_5mm2 Maize bHLH122 CRISPR, male sterile, 1.5 mm anthersSBSsRNA35,934,22925,019,3153,952,5323,915,96720M3418
122ms_2mm_1 Maize bHLH122 CRISPR, male sterile, 2.0 mm anthers, rep #1SBSsRNA20,527,75513,909,6873,655,5551,596,04920M3418
122ms_2mm_2 Maize bHLH122 CRISPR, male sterile, 2.0 mm anthers, rep #2SBSsRNA21,984,32315,449,2752,755,6012,338,44420M3418
122ms_3mm_1 Maize bHLH122 CRISPR, male sterile, 3.0 mm anthers, rep #1SBSsRNA19,116,26513,306,9372,947,7401,944,07620M3418
122ms_3mm_2 Maize bHLH122 CRISPR, male sterile, 3.0 mm anthers, rep #2SBSsRNA18,714,07213,151,4472,986,5671,752,98320M3418
HiII_1_0mm_1 HiII WT siblings, fertile, 1.0 mm anthers, rep #1SBSsRNA19,679,19613,823,0461,962,6752,071,66720M3418
HiII_1_0mm_2 HiII WT siblings, fertile, 1.0 mm anthers, rep #2SBSsRNA23,093,06616,204,2972,361,5802,377,72820M3418
HiII_1_5mm_1 HiII WT siblings, fertile, 1.5 mm anthers, rep #1SBSsRNA33,741,84123,346,9233,247,8502,712,56020M3418
HiII_1_5mm_2 HiII WT siblings, fertile, 1.5 mm anthers, rep #2SBSsRNA30,738,79820,954,2232,166,8081,202,76720M3418
HiII_2_0mm_1 HiII WT siblings, fertile, 2.0 mm anthers, rep #1SBSsRNA29,599,09521,133,9932,117,9141,603,00120M3418
HiII_2_0mm_2 HiII WT siblings, fertile, 2.0 mm anthers, rep #2SBSsRNA31,476,77822,193,0122,545,5711,127,17820M3418
HiII_3_0mm_1 HiII WT siblings, fertile, 3.0 mm anthers, rep #1SBSsRNA17,695,48812,463,2571,907,427993,13620M3418
HiII_3_0mm_2 HiII WT siblings, fertile, 3.0 mm anthers, rep #2SBSsRNA19,500,77613,451,1202,154,9271,155,12420M3418



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".
* The number of genomic-matches per small RNA ("hits") has been capped in this database at the following maximum: 50