Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.
Code | Title | Technology | Total Sequences |
Genome Matched Reads* |
Distinct Genome Matched Reads* |
t/r/sn/snoRNA Matched Reads |
Norm. Base Value |
Max. Len. of Reads |
Min. Len. of Reads |
Number of Mismatch |
GEO Accession Number |
---|---|---|---|---|---|---|---|---|---|---|---|
dc5F_2mm_1 | dcl5, CRISPR T2, ZNN14-1, 2.0 mm anthers, -1bp/wt, fertile | SBS | 25,852,398 | 22,507,701 | 9,411,825 | 234,890 | 20M | 50 | 18 | 1 | GSM3466701 |
dc5F_2mm_2 | dcl5, CRISPR T2, ZNN14-3, 2.0 mm anthers, -1bp/wt, fertile, Spike-in 1 | SBS | 22,707,551 | 18,612,229 | 7,459,297 | 563,188 | 20M | 50 | 18 | 1 | GSM3466702 |
dc5_1_2mm_1 | dcl5, CRISPR T2, ZNN14-5, 2.0 mm anthers, -1bp/-1bp, partial sterile, Spike-in 2 | SBS | 26,177,644 | 21,823,878 | 8,523,012 | 487,940 | 20M | 50 | 18 | 1 | GSM3466703 |
dc5_1_2mm_2 | dcl5, CRISPR T2, ZNN14-6, 2.0 mm anthers, -1bp/-1bp, partial sterile | SBS | 23,154,299 | 20,058,898 | 9,118,882 | 90,680 | 20M | 50 | 18 | 1 | GSM3466704 |
dc5_1_2mm_3 | dcl5, CRISPR T2, ZNN15-2, 2.0 mm anthers, -1bp/-1bp, partial sterile | SBS | 26,964,117 | 23,016,944 | 9,805,192 | 362,234 | 20M | 50 | 18 | 1 | GSM3466705 |
dc5_1_2mm_4 | dcl5, CRISPR T2, ZNN15-3, 2.0 mm anthers, -1bp/-1bp, partial sterile | SBS | 26,825,344 | 23,726,455 | 10,085,658 | 77,122 | 20M | 50 | 18 | 1 | GSM3466706 |
dc5_2_2mm_1 | dcl5, CRISPR T2, ZNN16-2, 2.0 mm anthers, -3bp/-3bp, partial sterile, Spike-in 1 | SBS | 25,002,197 | 21,351,446 | 8,070,426 | 195,659 | 20M | 50 | 18 | 1 | GSM3466707 |
dc5_2_2mm_2 | dcl5, CRISPR T2, ZNN16-3, 2.0 mm anthers, -3bp/-3bp, partial sterile | SBS | 28,568,522 | 25,161,355 | 10,221,124 | 50,879 | 20M | 50 | 18 | 1 | GSM3466708 |
dc5_3_2mm_1 | dcl5, CRISPR T2, ZNN27-6, 2.0 mm anthers, -12bp/-12bp, sterile, Spike-in 1 | SBS | 24,497,165 | 18,781,940 | 7,032,489 | 2,001,989 | 20M | 50 | 18 | 1 | GSM3466709 |
dc5_3_2mm_2 | dcl5, CRISPR T2, ZNN27-11, 2.0 mm anthers, -12bp/-12bp, sterile, Spike-in 2 | SBS | 25,494,811 | 16,548,005 | 6,532,905 | 4,909,966 | 20M | 50 | 18 | 1 | GSM3466710 |
dcl5_4_2mm_1 | dcl5, CRISPR T2, ZNN25-3, 2.0 mm anthers, 149bp/ 149bp, sterile, Spike-in 2 | SBS | 25,391,141 | 20,187,593 | 7,625,810 | 984,608 | 20M | 50 | 18 | 1 | GSM3466711 |
dcl5_4_2mm_2 | dcl5, CRISPR T2, ZNN27-10, 2.0 mm anthers, +149bp/ +149bp, sterile | SBS | 22,897,348 | 20,528,238 | 9,141,200 | 117,683 | 20M | 50 | 18 | 1 | GSM3466712 |
dcl5_5_2_0mm_a | Maize dcl5-5, CRISPR T2, 2.0 mm anthers, -10 bp/-10 bp, partial sterile, rep #1 | SBS | 51,220,846 | 45,535,698 | 13,190,592 | 416,746 | 20M | 50 | 18 | 1 | |
dcl5_5_2_0mm_b | Maize dcl5-5, CRISPR T2, 2.0 mm anthers, -10 bp/-10 bp, partial sterile, rep #2 | SBS | 49,011,938 | 43,041,489 | 12,622,588 | 446,378 | 20M | 50 | 18 | 1 | |
TP_dcl5_2_3a | Permissive temperature condition (23C/20C) treated dcl5-1 spikelets with 3 mm anther in upper floret and 2 mm anther in lower floret | SBS | 29,887,719 | 23,106,917 | 9,916,196 | 1,244,433 | 20M | 50 | 48 | 1 | GSM3466713 |
TR_dcl5_2_3a | Restrictive temperature condition (28C/22C) treated dcl5-1 spikelets with 3 mm anther in upper floret and 2 mm anther in lower floret | SBS | 22,928,299 | 16,267,742 | 7,535,495 | 1,210,732 | 20M | 50 | 48 | 1 | GSM3466714 |
TR_W23_1_5mm_a | W23 in 28/22 C, 1.5 mm anthers, rep 1, rep #1 | SBS | 46,739,999 | 37,581,940 | 7,267,409 | 1,166,981 | 20M | 50 | 18 | 1 | |
TR_W23_1_5mm_b | W23 in 28/22 C, 1.5 mm anthers, rep 2, rep #2 | SBS | 44,433,073 | 36,574,516 | 9,099,903 | 608,397 | 20M | 50 | 18 | 1 | |
TP_W23_1_5mm_a | W23 in 22/20 C, 1.5 mm anthers, rep 1, rep #1 | SBS | 49,277,907 | 40,169,773 | 9,750,244 | 1,196,421 | 20M | 50 | 18 | 1 | |
TP_W23_1_5mm_b | W23 in 22/20 C, 1.5 mm anthers, rep 2, rep #2 | SBS | 44,215,746 | 23,493,644 | 4,345,542 | 6,684,013 | 20M | 50 | 18 | 1 | |
TR_W23_2_0mm_a | W23 in 28/22 C, 2.0 mm anthers, rep 1, rep #1 | SBS | 44,086,076 | 36,357,670 | 9,830,213 | 467,948 | 20M | 50 | 18 | 1 | |
TR_W23_2_0mm_b | W23 in 28/22 C, 2.0 mm anthers, rep 2, rep #2 | SBS | 49,332,545 | 40,938,778 | 11,022,598 | 446,328 | 20M | 50 | 18 | 1 | |
TP_W23_2_0mm_a | W23 in 22/20 C, 2.0 mm anthers, rep 1, rep #1 | SBS | 48,289,111 | 39,648,649 | 9,824,154 | 486,467 | 20M | 50 | 18 | 1 | |
TP_W23_2_0mm_b | W23 in 22/20 C, 2.0 mm anthers, rep 2, rep #2 | SBS | 50,260,684 | 41,545,967 | 10,358,041 | 432,260 | 20M | 50 | 18 | 1 |