Maize RNA-seq Library Information

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Code Title Technology Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
Max.
Len. of
Reads
Min.
Len. of
Reads
Number
of
Mismatch
GEO
Accession
Number
dc5F_2mm_1 dcl5, CRISPR T2, ZNN14-1, 2.0 mm anthers, -1bp/wt, fertileSBS25,852,39822,507,7019,411,825234,89020M50181GSM3466701
dc5F_2mm_2 dcl5, CRISPR T2, ZNN14-3, 2.0 mm anthers, -1bp/wt, fertile, Spike-in 1SBS22,707,55118,612,2297,459,297563,18820M50181GSM3466702
dc5_1_2mm_1 dcl5, CRISPR T2, ZNN14-5, 2.0 mm anthers, -1bp/-1bp, partial sterile, Spike-in 2SBS26,177,64421,823,8788,523,012487,94020M50181GSM3466703
dc5_1_2mm_2 dcl5, CRISPR T2, ZNN14-6, 2.0 mm anthers, -1bp/-1bp, partial sterileSBS23,154,29920,058,8989,118,88290,68020M50181GSM3466704
dc5_1_2mm_3 dcl5, CRISPR T2, ZNN15-2, 2.0 mm anthers, -1bp/-1bp, partial sterileSBS26,964,11723,016,9449,805,192362,23420M50181GSM3466705
dc5_1_2mm_4 dcl5, CRISPR T2, ZNN15-3, 2.0 mm anthers, -1bp/-1bp, partial sterileSBS26,825,34423,726,45510,085,65877,12220M50181GSM3466706
dc5_2_2mm_1 dcl5, CRISPR T2, ZNN16-2, 2.0 mm anthers, -3bp/-3bp, partial sterile, Spike-in 1SBS25,002,19721,351,4468,070,426195,65920M50181GSM3466707
dc5_2_2mm_2 dcl5, CRISPR T2, ZNN16-3, 2.0 mm anthers, -3bp/-3bp, partial sterileSBS28,568,52225,161,35510,221,12450,87920M50181GSM3466708
dc5_3_2mm_1 dcl5, CRISPR T2, ZNN27-6, 2.0 mm anthers, -12bp/-12bp, sterile, Spike-in 1SBS24,497,16518,781,9407,032,4892,001,98920M50181GSM3466709
dc5_3_2mm_2 dcl5, CRISPR T2, ZNN27-11, 2.0 mm anthers, -12bp/-12bp, sterile, Spike-in 2SBS25,494,81116,548,0056,532,9054,909,96620M50181GSM3466710
dcl5_4_2mm_1 dcl5, CRISPR T2, ZNN25-3, 2.0 mm anthers, 149bp/ 149bp, sterile, Spike-in 2SBS25,391,14120,187,5937,625,810984,60820M50181GSM3466711
dcl5_4_2mm_2 dcl5, CRISPR T2, ZNN27-10, 2.0 mm anthers, +149bp/ +149bp, sterileSBS22,897,34820,528,2389,141,200117,68320M50181GSM3466712
dcl5_5_2_0mm_a Maize dcl5-5, CRISPR T2, 2.0 mm anthers, -10 bp/-10 bp, partial sterile, rep #1SBS51,220,84645,535,69813,190,592416,74620M50181
dcl5_5_2_0mm_b Maize dcl5-5, CRISPR T2, 2.0 mm anthers, -10 bp/-10 bp, partial sterile, rep #2SBS49,011,93843,041,48912,622,588446,37820M50181
TP_dcl5_2_3a Permissive temperature condition (23C/20C) treated dcl5-1 spikelets with 3 mm anther in upper floret and 2 mm anther in lower floretSBS29,887,71923,106,9179,916,1961,244,43320M50481GSM3466713
TR_dcl5_2_3a Restrictive temperature condition (28C/22C) treated dcl5-1 spikelets with 3 mm anther in upper floret and 2 mm anther in lower floretSBS22,928,29916,267,7427,535,4951,210,73220M50481GSM3466714
TR_W23_1_5mm_a W23 in 28/22 C, 1.5 mm anthers, rep 1, rep #1SBS46,739,99937,581,9407,267,4091,166,98120M50181
TR_W23_1_5mm_b W23 in 28/22 C, 1.5 mm anthers, rep 2, rep #2SBS44,433,07336,574,5169,099,903608,39720M50181
TP_W23_1_5mm_a W23 in 22/20 C, 1.5 mm anthers, rep 1, rep #1SBS49,277,90740,169,7739,750,2441,196,42120M50181
TP_W23_1_5mm_b W23 in 22/20 C, 1.5 mm anthers, rep 2, rep #2SBS44,215,74623,493,6444,345,5426,684,01320M50181
TR_W23_2_0mm_a W23 in 28/22 C, 2.0 mm anthers, rep 1, rep #1SBS44,086,07636,357,6709,830,213467,94820M50181
TR_W23_2_0mm_b W23 in 28/22 C, 2.0 mm anthers, rep 2, rep #2SBS49,332,54540,938,77811,022,598446,32820M50181
TP_W23_2_0mm_a W23 in 22/20 C, 2.0 mm anthers, rep 1, rep #1SBS48,289,11139,648,6499,824,154486,46720M50181
TP_W23_2_0mm_b W23 in 22/20 C, 2.0 mm anthers, rep 2, rep #2SBS50,260,68441,545,96710,358,041432,26020M50181



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".