Maize RNA-seq Library Information

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Code Title Technology Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
Max.
Len. of
Reads
Min.
Len. of
Reads
GEO
Accession
Number
A619_mRNA_1 Wildtype A619, 2 week old seedlings, biological rep 1SBS52,053,07226,205,31512,030,0786,438,33420M4518GSM1277448
A619_mRNA_2 Wildtype A619, 2 week old seedlings, biological rep 2SBS42,183,68122,866,5589,561,8704,138,17320M4518GSM1277449
A619_mRNA_4 wildtype A619, 2-week-old seedlings, rep 4SBS43,343,04828,350,28011,976,259359,93620M5018GSM1277450
A619_mRNA_5 fuzzy tassel mutant dcl1, 2-week-old seedlings, rep 5SBS39,813,19825,784,60310,806,778881,99420M5018GSM1277451
fzt_mRNA_1 fzt dcl1 mutant, 2 week old seedlings, biological rep 1SBS49,634,94526,136,65211,662,6054,933,62820M4518GSM1277452
fzt_mRNA_2 fzt dcl1 mutant, 2 week old seedlings, biological rep 2SBS38,720,74322,087,0389,460,644452,83120M4518GSM1277453
fzt_mRNA_4 wildtype A619, 2-week-old seedlings, rep 4SBS41,649,31327,541,21010,850,910159,42320M5018GSM1277454
fzt_mRNA_5 fuzzy tassel mutant dcl1, 2-week-old seedlings, rep 5SBS40,640,24326,366,77411,687,940200,30720M5018GSM1277455
1Tm_A619 wildtype A619, 0.5-1cm tassel primordial, rep 1SBS32,772,31721,328,67010,116,700962,06020M4518GSM1277456
2Tm_A619_mg wildtype A619, 0.5-1cm tassel primordial, rep 2SBS42,727,08825,230,95611,863,914884,03620M4518GSM1277457
3Tm_A619_mg wildtype A619, 0.5-1cm tassel primordial, rep 3SBS41,503,01025,515,46612,263,94276,50520M4518GSM1277458
1Tm_fzt fuzzy tassel mutant dcl1, 0.5-1cm tassel primordial, rep 1SBS28,352,81518,279,8519,272,3481,024,46920M4518GSM1277459
2Tm_fzt_mg fuzzy tassel mutant dcl1, 0.5-1cm tassel primordial, rep 2SBS37,153,96720,918,46710,260,9641,384,58320M4518GSM1277460
3Tm_fzt_mg fuzzy tassel mutant dcl1, 0.5-1cm tassel primordial, rep 3SBS35,718,17321,966,53411,219,20173,79420M4518GSM1277461



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".