Maize B73 RNA-seq Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Library Type Total
Sequences		 Genome
Matched
Reads*		 Distinct
Genome
Matched
Reads*		 t/r/sn/snoRNA
Matched
Reads		 Norm.
Base
Value		 Max.
Len. of
Reads		 Min.
Len. of
Reads		 GEO
Accession
Number
A619_mRNA_1 Wildtype A619, 2 week old seedlings, biological rep 1SBSRNAseq52,053,07226,099,72912,038,3246,788,48520M4518GSM1277448
A619_mRNA_2 Wildtype A619, 2 week old seedlings, biological rep 2SBSRNAseq42,183,68122,677,7739,566,5724,479,06020M4518GSM1277449
A619_mRNA_4 wildtype A619, 2-week-old seedlings, rep 4SBSRNAseq43,343,04828,351,60711,990,460413,60120M5018GSM1277450
A619_mRNA_5 fuzzy tassel mutant dcl1, 2-week-old seedlings, rep 5SBSRNAseq39,813,19825,738,69910,819,651991,31720M5018GSM1277451
fzt_mRNA_1 fzt dcl1 mutant, 2 week old seedlings, biological rep 1SBSRNAseq49,634,94526,062,81511,669,6855,193,57220M4518GSM1277452
fzt_mRNA_2 fzt dcl1 mutant, 2 week old seedlings, biological rep 2SBSRNAseq38,720,74322,092,4489,471,052498,52320M4518GSM1277453
fzt_mRNA_4 wildtype A619, 2-week-old seedlings, rep 4SBSRNAseq41,649,31327,554,56110,864,331192,48020M5018GSM1277454
fzt_mRNA_5 fuzzy tassel mutant dcl1, 2-week-old seedlings, rep 5SBSRNAseq40,640,24326,387,59111,703,239226,07920M5018GSM1277455
1Tm_A619 wildtype A619, 0.5-1cm tassel primordial, rep 1SBSRNAseq32,772,31721,320,87610,129,4321,024,47220M4518GSM1277456
2Tm_A619_mg wildtype A619, 0.5-1cm tassel primordial, rep 2SBSRNAseq42,727,08825,221,49811,880,172965,17820M4518GSM1277457
3Tm_A619_mg wildtype A619, 0.5-1cm tassel primordial, rep 3SBSRNAseq41,503,01025,543,79012,282,98087,85320M4518GSM1277458
1Tm_fzt fuzzy tassel mutant dcl1, 0.5-1cm tassel primordial, rep 1SBSRNAseq28,352,81518,266,2799,282,9001,088,87520M4518GSM1277459
2Tm_fzt_mg fuzzy tassel mutant dcl1, 0.5-1cm tassel primordial, rep 2SBSRNAseq37,153,96720,892,18410,273,6171,495,83120M4518GSM1277460
3Tm_fzt_mg fuzzy tassel mutant dcl1, 0.5-1cm tassel primordial, rep 3SBSRNAseq35,718,17321,990,57011,236,17684,01420M4518GSM1277461



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".