Maize RNA-seq Library Information

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Code Title Technology Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
Max.
Len. of
Reads
Min.
Len. of
Reads
GEO
Accession
Number
A619_mRNA_1 Wildtype A619, 2 week old seedlings, biological rep 1SBS52,053,07226,219,21612,060,5556,538,55820M4518GSM1277448
A619_mRNA_2 Wildtype A619, 2 week old seedlings, biological rep 2SBS42,183,68122,840,0329,588,9674,273,77120M4518GSM1277449
A619_mRNA_4 wildtype A619, 2-week-old seedlings, rep 4SBS43,343,04828,380,31611,974,076383,51020M5018GSM1277450
A619_mRNA_5 fuzzy tassel mutant dcl1, 2-week-old seedlings, rep 5SBS39,813,19825,784,20610,806,553936,81820M5018GSM1277451
fzt_mRNA_1 fzt dcl1 mutant, 2 week old seedlings, biological rep 1SBS49,634,94526,168,62911,683,9595,003,75920M4518GSM1277452
fzt_mRNA_2 fzt dcl1 mutant, 2 week old seedlings, biological rep 2SBS38,720,74322,170,8689,491,409467,62320M4518GSM1277453
fzt_mRNA_4 wildtype A619, 2-week-old seedlings, rep 4SBS41,649,31327,584,93010,847,266166,65720M5018GSM1277454
fzt_mRNA_5 fuzzy tassel mutant dcl1, 2-week-old seedlings, rep 5SBS40,640,24326,401,21711,686,308210,89920M5018GSM1277455
1Tm_A619 wildtype A619, 0.5-1cm tassel primordial, rep 1SBS32,772,31721,365,79110,128,839987,34520M4518GSM1277456
2Tm_A619_mg wildtype A619, 0.5-1cm tassel primordial, rep 2SBS42,727,08825,325,50711,903,892921,56520M5018GSM1277457
3Tm_A619_mg wildtype A619, 0.5-1cm tassel primordial, rep 3SBS41,503,01025,642,49212,303,88582,33420M5018GSM1277458
1Tm_fzt fuzzy tassel mutant dcl1, 0.5-1cm tassel primordial, rep 1SBS28,352,81518,301,0719,281,1091,048,82920M4518GSM1277459
2Tm_fzt_mg fuzzy tassel mutant dcl1, 0.5-1cm tassel primordial, rep 2SBS37,153,96720,980,48010,295,5911,428,91020M5018GSM1277460
3Tm_fzt_mg fuzzy tassel mutant dcl1, 0.5-1cm tassel primordial, rep 3SBS35,718,17322,069,80811,254,02078,49720M4518GSM1277461



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".