Maize RNA-seq Library Information

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Code Title Technology Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
Max.
Len. of
Reads
Min.
Len. of
Reads
GEO
Accession
Number
W23_0_2mm_1 W23 anthers, 0.2 mm, rep 1SBS40,763,34926,141,60611,528,33174,15010M5118
W23_0_2mm_2 W23 anthers, 0.2 mm, rep 2SBS26,940,10717,293,8518,804,97131,33310M5118
W23_0_4mm_1 W23 anthers, 0.4 mm, rep 1SBS24,344,58716,717,4818,329,033242,72910M4818
W23_0_4mm_2 W23 anthers, 0.4 mm, rep2SBS21,258,20412,148,0526,851,54727,17310M5118
W23_0_7mm_1 W23 anthers, 0.7 mm, rep 1SBS26,254,44618,375,0899,198,046132,63410M4818
W23_0_7mm_2 W23 anthers, 0.7 mm, rep2SBS22,530,99512,673,3806,958,20345,75510M5118
W23_1_0mm_r1 W23 anthers, 1.0 mm, rep 1SBS37,087,92423,068,9308,354,400111,06710M5118
W23_1_0mm_r2 W23 anthers, 1.0 mm, rep 2SBS30,557,58519,284,4178,181,80860,93710M5118
W23_1_5mm_r1 W23 anthers, 1.5 mm, rep 1SBS19,757,59312,337,5596,348,90940,22910M5118
W23_1_5mm_r2 W23 anthers, 1.5 mm, rep 2SBS24,976,35615,617,8747,465,64038,83510M5118
W23_2_0mm_r1 W23 anthers, 2.0 mm, rep 1SBS21,953,68113,550,2316,381,096109,71310M5118
W23_2_0mm_r2 W23 anthers, 2.0 mm, rep 2SBS25,365,30715,516,1936,889,302112,07010M5118
W23_2_5mm_r1 W23 anthers, 2.5 mm, rep 1SBS14,152,5307,910,3624,344,01789,97710M5118
W23_2_5mm_r2 W23 anthers, 2.5 mm, rep 2SBS10,673,6696,085,7043,704,95934,63010M5118
W23_3mm_1 W23 anthers, 3.0 mm, rep 1SBS19,404,94412,455,4096,716,97737,68710M5118
W23_3mm_2 W23 anthers, 3.0 mm, rep 2SBS47,606,33330,266,94212,453,803137,28610M5118
W23_4mm_1 W23 anthers, 4.0 mm, rep 1SBS40,164,74025,390,91910,420,646818,73510M5118
W23_4mm_2 W23 anthers, 4.0 mm, rep 2SBS42,498,00527,528,14210,968,460102,04610M5118
W23_5mm_1 W23 anthers, 5.0 mm, rep 1SBS39,425,10525,835,2638,818,75179,35710M5118
W23_5mm_2 W23 anthers, 5.0 mm, rep 2SBS50,920,90532,793,29312,037,42794,64010M5118
W23_pollen_1 W23 fertile pollen (control), rep 1SBS19,850,04412,285,4872,212,62888,96410M5118
ocl4_0_4mm ocl4 sterile anthers, 0.4 mm, rep 1SBS25,290,94718,589,1339,800,957199,52710M4818
ocl4_0_7mm ocl4 sterile anthers, 0.7 mm, rep 1SBS27,271,63719,868,14010,073,297486,03210M4818
ocl4_1mm_1 ocl4 sterile anthers, 1.0 mm, rep 1SBS38,151,67025,388,33212,152,87280,83010M5118
ocl4_1mm_2 ocl4 sterile anthers, 1.0 mm, rep 2SBS26,383,42217,319,1218,251,756109,71210M5118
ocl4_1_5mm_1 ocl4 sterile anthers, 1.5 mm, rep 1SBS66,294,32919,398,2047,144,99119,988,91410M5118
ocl4_1_5mm_2 ocl4 sterile anthers, 1.5 mm, rep 2SBS27,219,0479,371,7683,291,77010,720,72210M5118
ocl4_2_0mm_1 ocl4 sterile anthers, 2.0 mm, rep 1SBS40,086,64010,615,5053,926,01119,495,28810M5118
ocl4_2_0mm_2 ocl4 sterile anthers, 2.0 mm, rep 2SBS51,393,40711,199,4034,186,83629,777,95510M5118
mac1_0_4mm mac1 sterile anthers, 0.4 mm, rep 1SBS30,609,33622,019,73011,083,156265,09110M4818
mac1_0_7mm mac1 sterile anthers, 0.7 mm, rep 1SBS26,507,21418,531,7889,226,431521,73310M4818
mac1_1_0mm_1 mac1 sterile anthers, 1.0 mm, rep 1SBS37,598,44113,212,7215,056,93514,101,82510M5118
mac1_1_0mm_2 mac1 sterile anthers, 1.0 mm, rep 2SBS38,416,8089,160,7293,726,18520,839,52310M5118
mac1_1_5mm_1 mac1 sterile anthers, 1.5 mm, rep 1SBS16,753,9866,351,3903,425,9935,688,72810M5118
mac1_1_5mm_2 mac1 sterile anthers, 1.5 mm, rep 2SBS34,308,1769,942,4614,331,67215,959,74910M5118
mac1_2_0mm_1 mac1 sterile anthers, 2.0 mm, rep 1SBS30,617,46910,753,3684,211,34511,500,02210M5118
mac1_2_0mm_2 mac1 sterile anthers, 2.0 mm, rep 2SBS41,909,06614,169,6004,370,60617,365,94310M5118
ms23_0_4mm_r1 ms23 sterile anthers, 0.4 mm, rep 1SBS21,186,56013,345,5557,219,09735,10310M5118GSM2415852
ms23_0_7mm_r1 ms23 sterile anthers, 0.7 mm, rep 1SBS26,349,89616,774,1758,361,70641,81610M5118GSM2415853
ms23_0_7mm_r2 ms23 sterile anthers, 0.7 mm, rep 2SBS23,963,73415,364,0848,087,75331,09910M5118GSM2415854
ms23_1_0mm_r1 ms23 sterile anthers, 1.0 mm, rep 1SBS23,755,03615,194,6317,883,12430,54410M5118GSM2415855
ms23_1_0mm_r2 ms23 sterile anthers, 1.0 mm, rep 2SBS22,312,87414,185,3197,775,30448,52410M5118GSM2415856
ms23_1_5mm_r1 ms23 sterile anthers, 1.5 mm, rep 1SBS24,822,33816,086,1528,391,69227,60710M5118GSM2415857
ms23_1_5mm_r2 ms23 sterile anthers, 1.5 mm, rep 2SBS21,204,46113,682,2367,560,15319,85910M5118GSM2415858
ms23_2_0mm_r1 ms23 sterile anthers, 2.0 mm, rep 1SBS24,417,77815,826,3728,106,55235,67510M5118GSM2415859
ms23_2_0mm_r2 ms23 sterile anthers, 2.0 mm, rep 2SBS23,700,90315,389,5278,000,49539,71310M5118GSM2415860



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".
* The number of genomic-matches per small RNA ("hits") has been capped in this database at the following maximum: 50