Maize B73 RNA-seq Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Library Type Total
Sequences		 Genome
Matched
Reads*		 Distinct
Genome
Matched
Reads*		 t/r/sn/snoRNA
Matched
Reads		 Norm.
Base
Value		 Max.
Len. of
Reads		 Min.
Len. of
Reads		 GEO
Accession
Number
ZMB_AE Zea mays, B73; Post-emergence tasselSBSRNAseq18,398,31714,138,5476,671,40465,90010M3838SRX058600
ZMB_CA Zea mays, B73; Leaves 20-day old seedling - growth chamberSBSRNAseq32,375,42426,818,8197,397,910288,91610M3535SRX058609
ZMB_AO Zea mays, B73; Seed 10 days after pollinationSBSRNAseq26,175,54322,151,60610,488,4701,347,84510M3535SRX058608
ZMB_AL Zea mays, B73; Mature silkSBSRNAseq18,638,80215,561,9155,884,889285,48610M3535SRX058607
ZMB_AK Zea mays, B73; PollenSBSRNAseq27,844,56924,096,4973,412,574209,62810M3535SRX058606
ZMB_AJ Zea mays, B73; OvuleSBSRNAseq29,821,27825,156,52212,065,075398,84310M3535SRX058605
ZMB_AI Zea mays, B73; Whole anthersSBSRNAseq26,920,10222,062,1665,790,472305,22510M3535SRX058604
ZMB_AH Zea mays, B73; Endosperm 25 days after pollinationSBSRNAseq23,509,09119,354,5616,997,125338,31210M4040SRX058603
ZMB_AG Zea mays, B73; Embryo 25 days after pollinationSBSRNAseq19,703,05815,258,8347,297,602119,60410M3838SRX058602
ZMB_AF Zea mays, B73; Seed 5 days after pollinationSBSRNAseq19,703,05815,258,8347,297,602119,60410M3838SRX058601
ZMB_AD Zea mays, B73; Post-emergence cobSBSRNAseq18,253,06714,304,2317,939,292165,09010M3838SRX058599
ZMB_AC Zea mays, B73; Preemergence tasselSBSRNAseq19,762,50215,438,0297,662,775103,49310M3838SRX058598
ZMB_AB Zea mays, B73; Pre-emergence cobSBSRNAseq18,315,39514,598,4338,050,63550,18210M3838SRX058597
ZMB_AA Zea mays, B73; Leaves 20-day old seedling - field grownSBSRNAseq16,993,42812,786,3105,015,048100,50810M3838SRX058596
Lf_BSh Maize leaf, bundle-sheath cellsSBSRNAseq19,830,68513,668,5812,949,8781,403,08910M3635SRX018907
Lf_M Maize leaf, mesophyll cellsSBSRNAseq21,745,84314,011,4212,226,4771,910,30010M3636SRX018905
Lf_Tip Maize leaf, tip sectionSBSRNAseq18,697,75114,150,6855,490,920422,23410M3635SRX018904
Lf_4cm Maize leaf, 4 cm sectionSBSRNAseq25,914,73420,385,6665,598,3911,227,89410M3535SRX018903
Lf_1cm Maize leaf, 1 cm sectionSBSRNAseq14,743,56210,132,2864,894,367480,75810M3535SRX018902
Lf_bas Maize leaf, base sectionSBSRNAseq17,365,88712,890,3836,970,004848,41610M3635SRX018901



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".