Maize B73 RNA-seq Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Library Type Total
Sequences		 Genome
Matched
Reads*		 Distinct
Genome
Matched
Reads*		 t/r/sn/snoRNA
Matched
Reads		 Norm.
Base
Value		 Max.
Len. of
Reads		 Min.
Len. of
Reads		 GEO
Accession
Number
ZMB_AE Zea mays, B73; Post-emergence tasselSBSRNAseq18,398,31714,119,9796,662,52957,84810M3838SRX058600
ZMB_CA Zea mays, B73; Leaves 20-day old seedling - growth chamberSBSRNAseq32,375,42426,823,0237,390,045253,37610M3535SRX058609
ZMB_AO Zea mays, B73; Seed 10 days after pollinationSBSRNAseq26,175,54322,167,33610,477,8651,289,46710M3535SRX058608
ZMB_AL Zea mays, B73; Mature silkSBSRNAseq18,638,80215,556,9725,878,940271,67510M3535SRX058607
ZMB_AK Zea mays, B73; PollenSBSRNAseq27,844,56924,069,0343,409,141190,94110M3535SRX058606
ZMB_AJ Zea mays, B73; OvuleSBSRNAseq29,821,27825,147,16612,048,717368,74010M3535SRX058605
ZMB_AI Zea mays, B73; Whole anthersSBSRNAseq26,920,10222,038,0885,784,624277,84910M3535SRX058604
ZMB_AH Zea mays, B73; Endosperm 25 days after pollinationSBSRNAseq23,509,09119,370,3896,988,616299,78810M4040SRX058603
ZMB_AG Zea mays, B73; Embryo 25 days after pollinationSBSRNAseq19,703,05815,256,0387,289,208107,24610M3838SRX058602
ZMB_AF Zea mays, B73; Seed 5 days after pollinationSBSRNAseq19,703,05815,256,0387,289,208107,24610M3838SRX058601
ZMB_AD Zea mays, B73; Post-emergence cobSBSRNAseq18,253,06714,299,9797,929,472151,70310M3838SRX058599
ZMB_AC Zea mays, B73; Preemergence tasselSBSRNAseq19,762,50215,424,4357,652,98092,06510M3838SRX058598
ZMB_AB Zea mays, B73; Pre-emergence cobSBSRNAseq18,315,39514,588,3228,040,11844,72410M3838SRX058597
ZMB_AA Zea mays, B73; Leaves 20-day old seedling - field grownSBSRNAseq16,993,42812,789,1815,009,61686,60210M3838SRX058596
Lf_BSh Maize leaf, bundle-sheath cellsSBSRNAseq19,830,68513,947,4412,952,4271,085,72010M3635SRX018907
Lf_M Maize leaf, mesophyll cellsSBSRNAseq21,745,84314,525,5352,229,1991,350,26610M3636SRX018905
Lf_Tip Maize leaf, tip sectionSBSRNAseq18,697,75114,179,6465,487,089371,98110M3635SRX018904
Lf_4cm Maize leaf, 4 cm sectionSBSRNAseq25,914,73420,480,5955,594,1211,106,39010M3535SRX018903
Lf_1cm Maize leaf, 1 cm sectionSBSRNAseq14,743,56210,157,7134,890,751434,10510M3535SRX018902
Lf_bas Maize leaf, base sectionSBSRNAseq17,365,88712,928,8316,963,682779,15810M3635SRX018901



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".