Maize RNA-seq Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Total
Sequences		 Genome
Matched
Reads*		 Distinct
Genome
Matched
Reads*		 t/r/sn/snoRNA
Matched
Reads		 Norm.
Base
Value		 Max.
Len. of
Reads		 Min.
Len. of
Reads		 GEO
Accession
Number
ZMB_AE Zea mays, B73; Post-emergence tasselSBS18,398,31714,017,4656,585,58159,92010M3838SRX058600
ZMB_CA Zea mays, B73; Leaves 20-day old seedling - growth chamberSBS32,375,42425,469,1147,001,364260,42210M3535SRX058609
ZMB_AO Zea mays, B73; Seed 10 days after pollinationSBS26,175,54320,849,0379,891,6161,318,52610M3535SRX058608
ZMB_AL Zea mays, B73; Mature silkSBS18,638,80214,765,8195,560,021275,13910M3535SRX058607
ZMB_AK Zea mays, B73; PollenSBS27,844,56923,259,8623,235,083196,55510M3535SRX058606
ZMB_AJ Zea mays, B73; OvuleSBS29,821,27823,730,16311,369,144382,96410M3535SRX058605
ZMB_AI Zea mays, B73; Whole anthersSBS26,920,10221,154,6585,465,009285,02410M3535SRX058604
ZMB_AH Zea mays, B73; Endosperm 25 days after pollinationSBS23,509,09119,269,4806,906,534326,48510M4040SRX058603
ZMB_AG Zea mays, B73; Embryo 25 days after pollinationSBS19,703,05815,155,8357,205,179114,81510M3838SRX058602
ZMB_AF Zea mays, B73; Seed 5 days after pollinationSBS19,703,05815,155,8357,205,179114,81510M3838SRX058601
ZMB_AD Zea mays, B73; Post-emergence cobSBS18,253,06714,176,8237,835,128158,88410M3838SRX058599
ZMB_AC Zea mays, B73; Preemergence tasselSBS19,762,50215,305,6437,561,44095,51710M3838SRX058598
ZMB_AB Zea mays, B73; Pre-emergence cobSBS18,315,39514,461,3227,940,84747,46910M3838SRX058597
ZMB_AA Zea mays, B73; Leaves 20-day old seedling - field grownSBS16,993,42812,718,6154,950,79991,12710M3838SRX058596
Lf_BSh Maize leaf, bundle-sheath cellsSBS19,830,68513,691,2732,873,8811,119,87610M3635SRX018907
Lf_M Maize leaf, mesophyll cellsSBS21,745,84314,247,1112,166,8491,396,07410M3636SRX018905
Lf_Tip Maize leaf, tip sectionSBS18,697,75113,373,2265,154,830384,03410M3635SRX018904
Lf_4cm Maize leaf, 4 cm sectionSBS25,914,73419,289,1825,255,6521,151,79910M3535SRX018903
Lf_1cm Maize leaf, 1 cm sectionSBS14,743,5629,563,0484,590,446455,52610M3535SRX018902
Lf_bas Maize leaf, base sectionSBS17,365,88712,181,0656,556,698802,70410M3635SRX018901



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".