lettuce_sRNAv2 Next-Gen DB

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code	Title	Technology	Library Type	Total Sequences	Genome Matched Reads*	Distinct Genome Matched Reads*	Norm. Base Value	Max. Len. of Reads	Min. Len. of Reads	GEO Accession Number
Sal_12h	Salinas 12hpi with Bremia	SBS	sRNA	36,131,866	27,789,531	3,390,142	20M	34	18	GSM2230737
Sal_5d	Salinas 5dpi with Bremia	SBS	sRNA	42,361,230	32,982,071	4,417,231	20M	34	18	GSM2230738
Sal_12h_mock	Salinas 12hpi mock	SBS	sRNA	36,906,458	28,415,642	3,719,529	20M	34	18	GSM2230739
Sal_5d_mock	Salinas 5dpi mock	SBS	sRNA	37,078,714	27,527,189	2,970,409	20M	34	18	GSM2230740
Cob_12h	Cobham Green 12hpi with Bremia	SBS	sRNA	38,007,226	28,633,970	4,367,617	20M	34	18	GSM2230741
Cob_5d	Cobham Green 5dpi with Bremia	SBS	sRNA	33,476,101	21,798,068	2,346,308	20M	34	18	GSM2230742
Cob_12h_mock	Cobham Green 12hpi mock	SBS	sRNA	40,454,139	30,410,847	5,092,483	20M	34	18	GSM2230743
Cob_5d_mock	Cobham Green 5dpi mock	SBS	sRNA	40,038,411	29,492,589	3,321,533	20M	34	18	GSM2230744
Dia_12h	Diana 12hpi with Bremia	SBS	sRNA	35,058,026	27,325,531	2,575,167	20M	34	18	GSM2230745
Dia_12h_mock	Diana 12dpi mock	SBS	sRNA	30,859,519	24,623,893	2,320,284	20M	34	18	GSM2230746

* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".