Brachypodium Small RNA Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
Max.
Len. of
Reads
Min.
Len. of
Reads
GEO
Accession
Number
BDI08 RootSBS5,139,4303,943,002597,49304M3518GSM1266839
OBD03 SeedlingSBS2,624,7021,566,530548,31304M3018GSM1266840
BDI04 Leaf 1SBS5,207,5684,305,921959,51904M3418GSM1266841
BDI09 Leaf 2SBS7,027,2465,315,704270,70204M3518GSM1266842
BDI06 StemSBS3,855,5373,209,3221,435,13704M3418GSM1266843
OBD02 Leaf and stemSBS3,603,5812,316,244739,19804M3018GSM1266844
BDI05 Panicle 1SBS4,944,1824,102,1501,567,16004M3418GSM506621
OBD01 Panicle 2SBS3,992,3732,783,7251,191,80604M3018GSM506620
BDI02 Shoot control for stressSBS2,494,8491,975,853800,61504M3418GSM1266845
BDI03 Drought-stressed shootSBS1,351,2881,038,168351,24504M3418GSM1266846
BDI17 Salt-stressed shootSBS8,498,0427,275,1111,542,35404M3418GSM1266847
BDI01 Cold-stressed shootSBS722,947538,881260,13104M3418GSM1266848
BDI18 Heat-stressed shootSBS8,861,6087,336,5062,042,83704M3418GSM1266849
BDI19 Submergence-stressed shootSBS9,421,1257,586,8613,037,78004M3418GSM1266850
BDI15 Shoot control for low phosphateSBS11,491,9889,510,5542,086,84304M3418GSM1266851
BDI16 Phosphate-starved shootSBS12,405,20610,490,5722,153,42604M3418GSM1266852
OBD04 Pooled StressesSBS2,531,2781,753,994590,66004M3018GSM1266853



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".