Brachypodium PARE Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Library Type Total
Sequences		 Genome
Matched
Reads*		 Distinct
Genome
Matched
Reads*		 t/r/sn/snoRNA
Matched
Reads		 Norm.
Base
Value		 Max.
Len. of
Reads		 Min.
Len. of
Reads		 GEO
Accession
Number
BDI283 Control Bio #1SBSPARE117,767,52199,216,3508,223,0571,671,16210M2018GSM3067254
BDI490b Control Bio #2SBSPARE57,440,43248,364,9439,388,2974,018,34810M2018GSM3067260
BDI21 Leaf Bio #1SBSPARE13,772,83610,380,874689,6531,960,09910M2018GSM1266855
BDI288 Leaf Bio #2SBSPARE187,933,208158,753,8048,348,7214,029,20410M2018GSM3067257
BDI23 Stem Bio #1SBSPARE16,344,54212,896,1251,435,024118,58510M2018GSM1266856
BDI289 Stem Bio #2SBSPARE107,416,47590,895,96911,646,0122,812,39410M2018GSM3067258
BDI20 Root Bio #1SBSPARE10,748,4817,983,0751,655,3431,474,97910M2018GSM1266854
BDI381 Root Bio #2SBSPARE71,641,61363,986,73911,077,669719,23910M2018GSM3067259
BDI25 Panicle Bio #1SBSPARE29,026,27624,594,6343,439,9212,071,30610M2018GSM1266857
BDI287 Panicle Bio #2SBSPARE140,702,294112,508,81610,814,74817,081,00810M2018GSM3067256
BDI507 Cold Bio #1SBSPARE73,349,43162,234,42813,240,0962,238,85810M2118GSM3067263
BDI542 Cold Bio #2SBSPARE26,412,04823,943,2724,943,01646,72610M2018GSM3067266
BDI284 Drought Bio #1SBSPARE220,842,666175,091,5948,634,16616,139,92210M2018GSM3067255
BDI514 Drought BioBio #2SBSPARE30,336,99726,200,1414,957,9811,449,33210M2020GSM3067265
BDI491 Heat Bio #1SBSPARE36,696,78526,918,1087,013,8436,100,94610M2020GSM3067261
BDI544 Heat Bio #2SBSPARE73,000,28966,654,95710,511,013184,87210M2018GSM3067267
BDI508 Submergence Bio #1SBSPARE152,518,620129,366,74817,886,4756,099,40410M2118GSM3067264
BDI493 Submergence Bio #2SBSPARE47,441,93040,342,8808,201,8602,434,14910M2020GSM3067262



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".