Arabidopsis PARE Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
GEO
Accession
Number
AxIDT Col-0 inflorescence, oligo dT primed; degradome data (Axtell lab)SBS1,371,358961,038428,77628,6222MGSM278334
AxIRP Col-0 inflorescence, random primed; degradome data (Axtell lab)SBS7,179,8312,456,737356,3032,612,6152MGSM278335
AxSRP Col-0 seedling, random primed; degradome data (Axtell lab)SBS5,648,1212,161,970230,2401,592,1362MGSM278370
Col Col-0 inflorescence, control for ein5; GMUCT data (Ecker lab)SBS4,711,6752,242,387436,068128,2602MGSM284751
ein5 ein5-6 mutant inflorescence; GMUCT data (Ecker lab)SBS4,583,6352,183,450442,198129,5832MGSM284752
TWF Col-0 inflorescence, control for xrn4; PARE dataSBS17,711,72912,870,5712,294,5502,684,81110MGSM280226
Tx4F xrn4 mutant inflorescence; PARE dataSBS10,643,8287,513,9663,421,4971,608,61210MGSM280227



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".