Arabidopsis RNA-seq Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Library Type Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
Max.
Len. of
Reads
Min.
Len. of
Reads
GEO
Accession
Number
clb5_r1 Arabidopsis clb5 expanded cotyledon (sample-1)SBSRNAseq23,686,18711,586,6874,164,5864,657,36520M5018GSM4610200
clb5_r2 Arabidopsis clb5 expanded cotyledon (sample-2)SBSRNAseq24,748,03514,826,9444,929,3581,969,54120M5018GSM4610201
clb5_r3 Arabidopsis clb5 expanded cotyledon (sample-3)SBSRNAseq23,856,57314,592,7694,858,2201,383,46220M5018GSM4610202
pds3_r1 Arabidopsis pds3 expanded cotyledon (sample-1)SBSRNAseq39,409,45428,255,8626,507,7753,148,86720M5018GSM4610203
pds3_r2 Arabidopsis pds3 expanded cotyledon (sample-2)SBSRNAseq39,714,65428,590,2276,708,1433,027,35420M5018GSM4610204
pds3_r3 Arabidopsis pds3 expanded cotyledon (sample-3)SBSRNAseq38,297,36527,670,4946,558,6712,875,42920M5018GSM4610205
ccd4_clb5_r1 Arabidopsis ccd4 x clb5 expanded cotyledon (sample-1)SBSRNAseq41,743,50729,456,4417,686,1773,040,78220M5018GSM4610206
ccd4_clb5_r2 Arabidopsis ccd4 x clb5 expanded cotyledon (sample-2)SBSRNAseq39,074,17127,492,8217,327,2372,951,09120M5018GSM4610207
ccd4_clb5_r3 Arabidopsis ccd4 x clb5 expanded cotyledon (sample-3)SBSRNAseq28,327,70318,959,7515,872,6981,748,18820M5018GSM4610208
clb5_leaf_r1 Arabidopsis clb5 first true leaves (sample-1)SBSRNAseq29,608,51018,676,1455,767,506948,91420M5018GSM4610209
clb5_leaf_r2 Arabidopsis clb5 first true leaves (sample-2)SBSRNAseq28,944,76718,470,2955,714,594783,01720M5018GSM4610210
clb5_leaf_r3 Arabidopsis clb5 first true leaves (sample-3)SBSRNAseq28,707,69717,609,6135,567,7181,373,90620M5018GSM4610211
pds3_leaf_r1 Arabidopsis pds3 first true leaves (sample-1)SBSRNAseq33,727,87014,142,1684,909,29810,258,80620M5018GSM4610212
pds3_leaf_r2 Arabidopsis pds3 first true leaves (sample-2)SBSRNAseq30,699,45019,704,8166,340,5884,644,07220M5018GSM4610213
pds3_leaf_r3 Arabidopsis pds3 first true leaves (sample-3)SBSRNAseq24,974,94817,331,9205,773,4912,754,81920M5018GSM4610214
ccd4_clb5_leaf_1 Arabidopsis ccd4 x clb5 first true leaves (sample-1)SBSRNAseq27,347,99717,120,4425,916,1224,487,49020M5018GSM4610215
ccd4_clb5_leaf_2 Arabidopsis ccd4 x clb5 first true leaves (sample-2)SBSRNAseq25,938,88318,153,0336,062,3602,438,91820M5018GSM4610216
ccd4_clb5_leaf_3 Arabidopsis ccd4 x clb5 first true leaves (sample-3)SBSRNAseq28,465,67220,344,4506,505,5952,346,39320M5018GSM4610217



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".