Arabidopsis RNA-seq Library Information

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Code Title Technology Total
Sequences
Genome
Matched
Reads*
Distinct
Genome
Matched
Reads*
t/r/sn/snoRNA
Matched
Reads
Norm.
Base
Value
Max.
Len. of
Reads
Min.
Len. of
Reads
GEO
Accession
Number
m_WTc mRNA library from Arabidopsis wildtype Col-0SBS38,004,21532,597,53210,299,320325,87125M4218GSM913710
m_idn2 mRNA library from Arabidopsis mutant idn2SBS46,865,08840,223,81413,497,174225,94425M4218GSM913714
m_idn2_db mRNA library from Arabidopsis mutant idn2-like doubleSBS37,302,22533,249,69411,443,771210,69625M4218GSM913715
m_idn2_tp mRNA library from Arabidopsis mutant idn2-tripleSBS50,837,07445,243,53314,001,773238,42425M4218GSM913716
m_ago4 mRNA library from Arabidopsis mutant ago4SBS34,006,79430,211,97511,426,564284,73625M4218GSM913711
m_drm1_2 mRNA library from Arabidopsis mutant drm1/drm2SBS38,260,18734,232,90911,592,485682,16525M4218GSM913712
m_nrpe1 mRNA library from Arabidopsis mutant nrpe1SBS36,509,77730,180,43911,552,304390,90225M4018GSM913713
JE_Wt1 Wild-type replicate 1SBS11,853,86310,324,6664,489,44086,71925M4240GSM852792
JE_Wt2 Wild-type replicate 2SBS13,046,94711,615,7444,577,136154,16125M4240GSM852793
JE_Wt3 Wild-type replicate 3SBS7,853,5845,738,5652,933,44077,67625M4241GSM852794
fry1_6_1 fry1-6 replicate 1SBS12,667,37611,308,9234,988,346178,11725M4240GSM852795
fry1_6_2 fry1-6 replicate 2SBS12,488,74510,325,1614,492,222156,27125M4240GSM852796
fry1_6_3 fry1-6 replicate 3SBS9,065,4366,506,1893,320,654120,02125M4241GSM852797
xrn3_3_1 xrn3-3 replicate 1SBS30,499,10826,091,6088,064,377196,29625M5019GSM852798
xrn3_3_2 xrn3-3 replicate 2SBS30,959,67026,363,9148,052,110183,65925M5040GSM852799
xrn2_1xrn4_6_1 xrn2-1xrn4-6 replicate 1SBS29,499,89925,898,9078,411,031275,12525M5041GSM852800
xrn2_1xrn4_6_2 xrn2-1xrn4-6 replicate 2SBS28,517,83725,296,8818,304,914256,27125M5041GSM852801
xrn3_3xrn4_6_1 xrn3-3xrn4-6 replicate 1SBS29,421,02425,758,0538,433,349281,74225M5041GSM852802
xrn3_3xrn4_6_2 xrn3-3xrn4-6 replicate 2SBS26,454,33723,296,8517,920,714360,19025M5041GSM852803
Wt_3w_1 Wild-type-3w replicate 1SBS25,004,70821,076,9865,908,171215,92825M5041GSM852804
Wt_3w_2 Wild-type-3w replicate 2SBS8,157,3897,226,0883,090,940142,84325M5041GSM852805
xrn2_1xrn3_3_1 xrn2-1xrn3-3 replicate 1SBS24,832,16421,657,9425,813,699157,71325M5041GSM852806
xrn2_1xrn3_3_2 xrn2-1xrn3-3 replicate 2SBS29,380,39125,225,5136,980,919140,82725M5039GSM852807



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".