Asparagus RNA-seq Library Information

Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. Adjust libraries/reads to display on the control panel.

Code Title Technology Library Type Total
Sequences		 Genome
Matched
Reads*		 Distinct
Genome
Matched
Reads*		 t/r/sn/snoRNA
Matched
Reads		 Norm.
Base
Value		 Max.
Len. of
Reads		 Min.
Len. of
Reads		 GEO
Accession
Number
Aspof_2_XXpost Asparagus officinalis, line 2 XX female postmeiotic budSBSRNAseq40,923,56324,392,65810,360,239030M5018SRX750983
Aspof_2_XXmei Asparagus officinalis, line 2 XX female meiotic budSBSRNAseq63,788,88140,173,18612,558,041030M5018SRX750979
Aspof_2_XXpre Asparagus officinalis, line 2 XX female premeiotic budSBSRNAseq64,087,46840,029,69212,844,431030M5018SRX750379
Aspof_1_YYpost Asparagus officinalis, line 1 YY supermale postmeiotic budSBSRNAseq64,663,10740,061,43913,457,751030M5018SRX750366
Aspof_1_YYmei Asparagus officinalis, line 1 YY supermale meiotic budSBSRNAseq51,088,56831,379,14611,057,058030M5018SRX750362
Aspof_1_YYpre Asparagus officinalis line 1 YY supermale premeiotic budSBSRNAseq58,808,52735,986,54212,776,296030M5018SRX750360
Aspof_DH3389 Asparagus officinalis, line DH3389 YY supermale spear tipSBSRNAseq63,427,19340,098,75811,577,108030M5018SRX750358
Aspof_DH0086 Asparagus officinalis, line DH0086 YY supermale spear tipSBSRNAseq61,174,24244,128,79313,194,858030M5018SRX750357
Aspof_9M Asparagus officinalis, line 9 XY male spear tipSBSRNAseq57,066,57436,073,26913,223,546030M5018SRX750354
Aspof_9F Asparagus officinalis, line 9 XX female spear tipSBSRNAseq72,715,17743,474,46413,825,012030M5018SRX750353
Aspof_10supM Asparagus officinalis, line 10 YY supermale spear tipSBSRNAseq2,781,9541,750,0381,347,500030M5018SRX750350
Aspof_10M Asparagus officinalis, line 10 XY male spear tipSBSRNAseq127,659,32381,022,53721,492,384030M5018SRX750349
Aspof_10F Asparagus officinalis, line 10 XX female spear tipSBSRNAseq79,492,72248,435,20415,249,706030M5018SRX750348
Aspof_8BsupM Asparagus officinalis, line 8B YY supermale spear tipSBSRNAseq46,974,16429,956,08111,818,297030M5018SRX750347
Aspof_8BM Asparagus officinalis, line 8B XY male spear tipSBSRNAseq13,345,8318,709,8854,878,776030M5018SRX750346
Aspof_8BF Asparagus officinalis, line 8B XX female spear tipSBSRNAseq66,417,97540,955,79613,584,776030M5018SRX750345
Aspof_8AsupM Asparagus officinalis, line 8A YY supermale spear tipSBSRNAseq70,466,38146,345,51514,960,877030M5018SRX750344
Aspof_8AM Asparagus officinalis, line 8A XY male spear tipSBSRNAseq66,824,02745,068,57314,840,735030M5018SRX750343
Aspof_8AF Asparagus officinalis, line 8A XX female spear tipSBSRNAseq22,671,34515,001,3406,738,782030M5018SRX750337
Asp_leaf Asparagus, leaf, BM14-72SBSRNAseq31,990,89214,689,7853,111,396030M5035GSM3083924
Asp_le Asparagus, leaf, BM14-72SBSRNAseq34,433,76815,163,1232,790,839030M7530GSM3083927
Asp_0_5_ant_budr Asparagus, <0.5 mm anthers (whole buds), BM14-181SBSRNAseq26,788,74710,593,3412,705,267030M5035GSM3083922
Asp_0_5_ant_b Asparagus, <0.5 mm anthers (whole buds), BM14-181SBSRNAseq30,330,54711,161,5762,398,817030M7530GSM3083925
Asp_1_ant_budr Asparagus, 0.5 - 1.0 mm anthers (whole buds), BM14-182SBSRNAseq24,637,15210,657,2802,806,208030M5035GSM3083923
Asp_1_ant_b Asparagus, 0.5 - 1.0 mm anthers (whole buds), BM14-182SBSRNAseq30,145,99412,318,8252,626,247030M7530GSM3083926



* Does not include the data listed in the column "t/r/sn/snoRNA Matched Reads".