Tomato Small RNA
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Tomato small RNA Analysis
The basic information for the gene or region you select may be displayed below.
New Search
Control Panel
Legend
JSON Data
Library Abundances
Interactive View
Start a new gene search
Gene ID:
Model # (optional):
Padding at each end:
nt
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new coordinate search
Select chromosome or contig
Chr 1 (90863682 bp)
Chr 2 (53473368 bp)
Chr 3 (65298490 bp)
Chr 4 (64459972 bp)
Chr 5 (65269487 bp)
Chr 6 (47258699 bp)
Chr 7 (67883646 bp)
Chr 8 (63995357 bp)
Chr 9 (68513564 bp)
Chr 10 (64792705 bp)
Chr 11 (54379777 bp)
Chr 12 (66688036 bp)
Unmapped BAC Regions (9643250 bp)
Start:
End:
Padding at each end:
nt Mark the unpadded region:
yes
no
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new cluster search
A cluster ID is of the format 'TOMATO_SGN4.[chr_id].[start].[length]'.
Cluster ID:
Size (ignore the size specified in cluster ID):
250 bp
500 bp
1 kb
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X