Tauschii RNA-seq
Home / Basic Queries
Other Queries
miRNA Abundances
Chromosome Viewer
Bulk Loci Query
PHAS Loci
Multi-DB Query
Library Information
Analysis Apps
miRNA Tools
Resources
FAQs & Help
Publications
Links
JSON Web Services
Lists of PHAS Loci
About Us
Contact & Credits
Meyers Lab
DBs for Same Genome
Small RNA
Small RNA - 2
Ae. tauschii
RNA-seq Analysis
The basic information for the gene or region you select may be displayed below.
New Search
Control Panel
Legend
JSON Data
Library Abundances
Interactive View
Start a new gene search
Gene ID:
Model # (optional):
Padding at each end:
nt
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new coordinate search
Select chromosome or contig
Chr 1D (502330251 bp)
Chr 2D (651661114 bp)
Chr 3D (627182665 bp)
Chr 4D (526018785 bp)
Chr 5D (577375663 bp)
Chr 6D (496019527 bp)
Chr 7D (644716137 bp)
Unmapped BAC Regions (254398752 bp)
Start:
End:
Padding at each end:
nt Mark the unpadded region:
yes
no
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new cluster search
A cluster ID is of the format 'TAUSCHII_UCDavis4.[chr_id].[start].[length]'.
Cluster ID:
Size (ignore the size specified in cluster ID):
250 bp
500 bp
1 kb
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X