Chicken Small RNA
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Chicken small RNA Analysis
The basic information for the gene or region you select may be displayed below.
New Search
Control Panel
Legend
JSON Data
Library Abundances
Interactive View
Start a new gene search
Gene ID:
Model # (optional):
Padding at each end:
nt
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new coordinate search
Select chromosome or contig
gga_chr1 (200994015 bp)
gga_chr2 (154873767 bp)
gga_chr3 (113657789 bp)
gga_chr4 (94230402 bp)
gga_chr5 (62238931 bp)
gga_chr6 (37400442 bp)
gga_chr7 (38384769 bp)
gga_chr8 (30671729 bp)
gga_chr9 (25554352 bp)
gga_chr10 (22556432 bp)
gga_chr11 (21928095 bp)
gga_chr12 (20536687 bp)
gga_chr13 (18911934 bp)
gga_chr14 (15819469 bp)
gga_chr15 (12968165 bp)
gga_chr16 (432983 bp)
gga_chr17 (11182526 bp)
gga_chr18 (10925261 bp)
gga_chr19 (9939723 bp)
gga_chr20 (13986235 bp)
gga_chr21 (6959642 bp)
gga_chr22 (3936574 bp)
gga_chr23 (6042217 bp)
gga_chr24 (6400109 bp)
gga_chr25 (2031799 bp)
gga_chr26 (5102438 bp)
gga_chr27 (4841970 bp)
gga_chr28 (4512026 bp)
gga_chr32 (1028 bp)
gga_chrW (259642 bp)
gga_chrZ (74602320 bp)
gga_chrMT (16775 bp)
MDV1 (AF243438) (177874 bp)
MDV2 (NC_002577) (164270 bp)
HVT (AF291866) (159160 bp)
ILTV (NC_006623) (148687 bp)
Start:
End:
Padding at each end:
nt Mark the unpadded region:
yes
no
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new cluster search
A cluster ID is of the format 'GG_WASHUC2.[chr_id].[start].[length]'.
Cluster ID:
Size (ignore the size specified in cluster ID):
250 bp
500 bp
1 kb
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X