Arabidopsis RNA-seq Gene Analysis

The basic information for the gene you have selected is displayed below. The "RNA-seq Information" section sums the reads that map to either strand of the gene of interest, indicating the total (normalized) read abundance, the count of distinct (different) sequences, and providing links to a downloadable file with that information, and web pages that provide detailed information on the complete set of individual sequences derived from the gene. View a legend that explains the icons and colors in the image below. Adjust libraries/reads or change display options on the control panel.

Interactive View (may be slow to load)


Gene Chr Strand Gene Type 5' End 3' End Model # of Splice Variants
AT2G27400 2 c misc_RNA 11,722,468 11,721,539 1 No splice variant annotated
    Predicted function: TAS1A; other RNA

RNA-seq Information

(it may be slow to load)

View data on the reads associated with this gene