Asparagus RNA-seq
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Asparagus RNA-seq Analysis
The basic information for the gene or region you select may be displayed below.
New Search
Control Panel
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JSON Data
Library Abundances
Interactive View
Start a new gene search
Gene ID:
Model # (optional):
Padding at each end:
nt
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new coordinate search
Select chromosome or contig
Chr 1 (132393751 bp)
Chr 2 (84732013 bp)
Chr 3 (113259003 bp)
Chr 4 (146560859 bp)
Chr 5 (131469567 bp)
Chr 6 (78779235 bp)
Chr 7 (151357931 bp)
Chr 8 (131339754 bp)
Chr 9 (68543460 bp)
Chr 10 (73452336 bp)
Chr 11 (87441391 bp)
Start:
End:
Padding at each end:
nt Mark the unpadded region:
yes
no
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X
Start a new cluster search
A cluster ID is of the format 'ASPARAGUS_UGA.[chr_id].[start].[length]'.
Cluster ID:
Size (ignore the size specified in cluster ID):
250 bp
500 bp
1 kb
Base pairs per pixel:
1 - Enormous
3 - Very large
5 - Optimal for printed figures
10 - Standard
15 - Narrow
20 - Very narrow
Image scaling:
None
2X
3X
6X
10X
20X