About This Database    FAQs

Annotated species Triticum aestivum Annotation built on University of Western Australia v1 Total number of genes 23,205
Library type RNA-seq Total bp in genome 1,385,068,128 Protein coding 23,205
Total number of libraries 8 Total chrs or contigs 22 Transposon related 0

This website is based in part on the wheat data published in doi: 10.1111/tpj.13515. The public RNA-seq data were primarily gathered from Genbank.

Access to this web site and the data contained herein are provided for research purposes only. No commercial rights of any nature are granted.

Basic Queries

Please enter specific information to retrieve data.
Adjust libraries/reads to display on the control panel (optional).

Protein or gene ID
Bulk Query

e.g. BP_g9838
Cluster or coordinate ID
Bulk Query

e.g. WHEAT_UWA1.1.2001.500 (cluster)   WHEAT_UWA1.1.2001.4500 (coordinate)
Sequence of RNA-seq read
Bulk Query
Keyword for genes/proteins or repeats

e.g. MIRNA  LTR

Query by Chromosome Position

Click on a region of any chromosome for which you would like to retrieve the map. Because of the size of chromosomes, clicking on the diagram below will take you to a second map where you can refine the position. Note that if the genome has a mix of both chromosomes and small contigs or scaffolds, we only show images for the defined chromosomes, and contigs must be accessed via their ID.

0 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8425,278,842 - 5,278,8420 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9706,838,970 - 6,838,9700 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0114,122,011 - 4,122,0110 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3583,698,358 - 3,698,3580 - 6,661,9526,661,952 - 6,661,9526,661,952 - 6,661,9526,661,952 - 6,661,9526,661,952 - 6,661,9526,661,952 - 6,661,9526,661,952 - 6,661,9526,661,952 - 6,661,9526,661,952 - 6,661,9526,661,952 - 6,661,9526,661,952 - 6,661,9526,661,952 - 6,661,9526,661,952 - 6,661,9526,661,952 - 6,661,9526,661,952 - 6,661,9526,661,952 - 6,661,9526,661,952 - 6,661,9526,661,952 - 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4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1394,048,139 - 4,048,1390 - 25,000,00025,000,000 - 50,000,00050,000,000 - 75,000,00075,000,000 - 100,000,000100,000,000 - 125,000,000125,000,000 - 150,000,000150,000,000 - 175,000,000175,000,000 - 200,000,000200,000,000 - 225,000,000225,000,000 - 250,000,000250,000,000 - 275,000,000275,000,000 - 300,000,000300,000,000 - 325,000,000325,000,000 - 350,000,000350,000,000 - 375,000,000375,000,000 - 400,000,000400,000,000 - 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5,076,5885,076,588 - 5,076,5880 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9897,901,989 - 7,901,9890 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3596,962,359 - 6,962,3590 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1758,277,175 - 8,277,1750 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1552,898,155 - 2,898,1550 - 10,196,06910,196,069 - 10,196,06910,196,069 - 10,196,06910,196,069 - 10,196,06910,196,069 - 10,196,06910,196,069 - 10,196,06910,196,069 - 10,196,06910,196,069 - 10,196,06910,196,069 - 10,196,06910,196,069 - 10,196,06910,196,069 - 10,196,06910,196,069 - 10,196,06910,196,069 - 10,196,06910,196,069 - 10,196,06910,196,069 - 10,196,06910,196,069 - 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4,883,3784,883,378 - 4,883,3780 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2885,981,288 - 5,981,2880 - 3,649,0863,649,086 - 3,649,0863,649,086 - 3,649,0863,649,086 - 3,649,0863,649,086 - 3,649,0863,649,086 - 3,649,0863,649,086 - 3,649,0863,649,086 - 3,649,0863,649,086 - 3,649,0863,649,086 - 3,649,0863,649,086 - 3,649,0863,649,086 - 3,649,0863,649,086 - 3,649,0863,649,086 - 3,649,0863,649,086 - 3,649,0863,649,086 - 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25,272,85325,272,853 - 25,272,85325,272,853 - 25,272,85325,272,853 - 25,272,85325,272,853 - 25,272,85325,272,853 - 25,272,85325,272,853 - 25,272,85325,272,853 - 25,272,8530 - 25,000,00025,000,000 - 50,000,00050,000,000 - 75,000,00075,000,000 - 100,000,000100,000,000 - 125,000,000125,000,000 - 150,000,000150,000,000 - 175,000,000175,000,000 - 200,000,000200,000,000 - 225,000,000225,000,000 - 250,000,000250,000,000 - 275,000,000275,000,000 - 300,000,000300,000,000 - 325,000,000325,000,000 - 350,000,000350,000,000 - 375,000,000375,000,000 - 400,000,000400,000,000 - 425,000,000425,000,000 - 450,000,000450,000,000 - 452,794,918452,794,918 - 452,794,918452,794,918 - 452,794,918452,794,918 - 452,794,918452,794,918 - 452,794,918452,794,918 - 452,794,918452,794,918 - 452,794,918452,794,918 - 452,794,918452,794,918 - 452,794,918452,794,918 - 452,794,918452,794,918 - 452,794,918452,794,918 - 452,794,918452,794,918 - 452,794,918452,794,918 - 452,794,918 Chromosome image

If you know the start and/or end of your genomic region, please enter one or both coordinates here to go directly to our chromosome viewer. If you only enter one coordinate, we use a default size of 100 kb for the viewer.