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Annotated species Ananas comosus Annotation built on ConGenIE 3.0 Total number of genes 29,771
Library type RNA-seq Total bp in genome 383,104,719 Protein coding 29,771
Total number of libraries 11 Total chrs or contigs 3,894 Transposon related 0

The genomic data is from the Pineapple Genome Project, published in Nature. The RNA-seq data were contributed by the laboratory of Ray Ming at the University of Illinois, published in the Plant Journal.

Some data contributed by: Ray Ming (University of Illinois).

Access to this web site and the data contained herein are provided for research purposes only. No commercial rights of any nature are granted.

Basic Queries

Please enter specific information to retrieve data.
Adjust libraries/reads to display on the control panel (optional).

Protein or gene ID
Bulk Query

e.g. Aco000712
Cluster or coordinate ID
Bulk Query

e.g. PINEAPPLE_UIUC3.1.2001.500 (cluster)   PINEAPPLE_UIUC3.1.2001.4500 (coordinate)
Sequence of RNA-seq read
Bulk Query
Keyword for genes/proteins or repeats


Query by Chromosome Position

If you know the start and/or end of your genomic region, please enter one or both coordinates here to go directly to our chromosome viewer. If you only enter one coordinate, we use a default size of 100 kb for the viewer.